Pairwise Alignments

Query, 337 a.a., protease from Vibrio cholerae E7946 ATCC 55056

Subject, 427 a.a., collagenase precursor (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  124 bits (310), Expect = 6e-33
 Identities = 93/313 (29%), Positives = 144/313 (46%), Gaps = 52/313 (16%)

Query: 2   ELLCPAGNLPALKTAIDCGADAVYIGFKDDTNARHFAGLNFSGKKLEKAVDYVHDHNKKI 61
           E++ P G+  +L  AI  GAD++Y G  ++ N R  +   F+   L +      +H  K 
Sbjct: 7   EIMAPVGSRESLAAAIQAGADSIYFGI-ENLNMRARSANTFTVDDLREIAQTCDEHGMKS 65

Query: 62  HIALNTFAHPNGFERWTNAVDQAADLGVDALIIADIAVLEYAARHYPHLELHLSVQASAT 121
           ++ +NT  +          VD A   G+ A+I AD+AV+ YA +     E+HLS Q + +
Sbjct: 66  YLTVNTIIYDKDIPLMRTIVDAAKAAGISAVIAADVAVMNYARQ--IGQEVHLSTQLNIS 123

Query: 122 NVKAVEFYHQNFNVKRVVLPRVLSIHQVKQLSRNI-------PQG--VELEVFAFGSLCI 172
           N +A++FY Q  +V  VVL R L++ QV ++ R I       P G  + +E+F  G+LC+
Sbjct: 124 NAEALKFYAQFADV--VVLARELNLEQVAEIYRQIREENICGPSGEQIRIEMFCHGALCM 181

Query: 173 MSEGRCYLSSYMTGESPN---TVGACSPAKYVRWQETESGLESRLNEILIDKYAAGENAG 229
              G+CYLS +    S N    +  C  +  VR +ET+  L                   
Sbjct: 182 AVSGKCYLSLHEMNHSANRGACMQVCRRSYTVRDKETDVEL------------------- 222

Query: 230 YPTLCKGRFITDIEGERKCYHALEEPTSLNTLSLLPELFAANVASVKIEGRQRSPAYVEQ 289
                      DI+ E      +  P  L T+  + ++  A V   KIEGR R P YV  
Sbjct: 223 -----------DIDNE-----YIMSPKDLKTIHFMNKMMDAGVRVFKIEGRARGPEYVRT 266

Query: 290 VTRTWRAAIDRYL 302
           V   ++ AI  YL
Sbjct: 267 VVECYKEAIKAYL 279