Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., DNA-damage-inducible protein F from Pseudomonas fluorescens FW300-N2E2

 Score = 82.4 bits (202), Expect = 3e-20
 Identities = 99/441 (22%), Positives = 184/441 (41%), Gaps = 28/441 (6%)

Query: 3   NRSIYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGIGM 62
           +R  +R+      P + + +   L  +VD   IGH   A  L  + V   +   +     
Sbjct: 10  DRLTHRRVWALAAPMILSNISVPLVALVDSTVIGHLPHAHQLGAVAVGASLYTVLAWAMG 69

Query: 63  LVGVGTGALASIKQGEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAEGR 122
            + +GT   A+   G G   + +++L  GL+  + LA ++  +   ++D  L +      
Sbjct: 70  FLRMGTTGFAAQAAGRGDGAALRQVLLQGLLLAMGLAVLLGAVGVPLSDVALHFMQPSAE 129

Query: 123 VFELGLQYLQVLIVGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIAWL 182
           + +L   +    + G    L S A+        +      ++++  L NIAL+  F+  L
Sbjct: 130 LNQLTRDFFHTRLFGLPAALASYALVGWFLGAQNARAPLAILLVTNLVNIALNLWFVIGL 189

Query: 183 QWELTGAAIATTLAQVVVTLLGLAYFFSARANMR-----LTRRCLRLEWHSLPKIFAIGV 237
            W +TG+A A+ +A+    L+GLA    AR  +R     +    L L W S   + A+  
Sbjct: 190 DWGVTGSARASVIAEWTGALVGLAL---ARHTLRAWPGQIAWAALGL-WQSWRPLLAVNR 245

Query: 238 SSFFMYAYGSTMVALHNTLMIEYGNA-VMVGAYAVMGYIVTIYYLTVEGIANGMQPLASY 296
             F        +  L        G+A V   A  + G ++T + L  +G+A+ ++ L  +
Sbjct: 246 DIFIRSLVLQAVFFLITVQGARLGDATVAANALLLNGLLLTAHAL--DGLAHAVEALCGH 303

Query: 297 HFGARNYDHIRKLLRLAMGIAVLGGMAFVLVLNLFPEQAIAIFNSSDSELIAGAQMGI-- 354
             GAR+   +R+ L +A G +++  + F L L L          +   ++ A A   +  
Sbjct: 304 AIGARDRLALRRSLVVACGWSLIASLGFAL-LFLLAGHLFIDMQTDIPDVRATAYHYLPY 362

Query: 355 --KLHLFAMY---LDGFLVVSAAYYQSTNRGGKAMFITVGNMSIMLPFLFILPQFFGLTG 409
              L L A++   LDG  + +    +  N     M +T   + ++LP  + L Q  G  G
Sbjct: 363 LAALPLIAVWSYLLDGLFIGATRAREMRN----GMLLT---LLLVLPIAWAL-QGLGNHG 414

Query: 410 VWIALPISNIVLSTVVGIMLW 430
           +WI   +   + S  +G   W
Sbjct: 415 LWITFLLFMALRSLTLGAFAW 435