Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., MATE family efflux transporter from Pseudomonas fluorescens FW300-N2C3

 Score = 76.3 bits (186), Expect = 2e-18
 Identities = 93/446 (20%), Positives = 180/446 (40%), Gaps = 38/446 (8%)

Query: 3   NRSIYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGIGM 62
           +R  +R+      P + + +   L  +VD   IGH   A  L  + V   +   +     
Sbjct: 10  DRLTHRRVWALAAPMILSNISVPLVALVDSTVIGHLPHAHQLGAVAVGASLYTVLAWAMG 69

Query: 63  LVGVGTGALASIKQGEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAEGR 122
            + +GT   A+   G G   + +++L  GL+  + LA ++  +   ++D  L +      
Sbjct: 70  FLRMGTTGFAAQAAGRGDGAALRQVLLQGLLLAMGLALLLGAVGVPLSDVALHFMQPSAE 129

Query: 123 VFELGLQYLQVLIVGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIAWL 182
           + +L   +    + G    L S A+        +      ++++  L NIAL+  F+  L
Sbjct: 130 LNQLTRDFFHTRLFGLPAALASYALVGWFLGAQNARAPLAILLVTNLVNIALNLWFVIGL 189

Query: 183 QWELTGAAIATTLAQVVVTLLGLAYFFSARANMRLTRRCLRL-----------EWHSLPK 231
            W +TG+A A+ +A+    L+GLA          L R+ LR             W +   
Sbjct: 190 DWGVTGSARASVIAEWTGALVGLA----------LARKTLRAWPGQMAWAALGVWQNWRP 239

Query: 232 IFAIGVSSFFMYAYGSTMVALHNTLMIEYGNA-VMVGAYAVMGYIVTIYYLTVEGIANGM 290
           + A+    F        +  L        G+A V   A  + G ++T + L  +G+A+ +
Sbjct: 240 LLAVNRDIFIRSLALQAVFFLITVQGARLGDATVAANALLLNGLLLTAHAL--DGLAHAV 297

Query: 291 QPLASYHFGARNYDHIRKLLRLAMGIAVLGGMAFVLVL----NLFPEQAIAI--FNSSDS 344
           + L  +  GAR+   +R+ L +A G +++  + F L+     +LF +    I    ++  
Sbjct: 298 EALCGHAIGARDRLALRRSLVVAGGWSLIASLGFALLFLLAGHLFIDMQTDIPDVRATAY 357

Query: 345 ELIAGAQMGIKLHLFAMYLDGFLVVSAAYYQSTNRGGKAMFITVGNMSIMLPFLFILPQF 404
           + +        + +++  LDG L + A   +    G     + V  ++ ML  L      
Sbjct: 358 DYLPYLATLPLIAVWSYLLDG-LFIGATRAREMRNGMLLTLLLVSPIAWMLLGL------ 410

Query: 405 FGLTGVWIALPISNIVLSTVVGIMLW 430
            G  G+WI   +   + S  +G   W
Sbjct: 411 -GNHGLWITFLLFMALRSLTLGAFAW 435