Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., putative efflux protein, MATE family from Pseudomonas stutzeri RCH2

 Score = 90.9 bits (224), Expect = 8e-23
 Identities = 105/428 (24%), Positives = 185/428 (43%), Gaps = 26/428 (6%)

Query: 16  PTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGIGMLVGVGTGALASIK 75
           P + + L   L  +VD   IGH   A  L  + V   +   ++ +   + +GT   A+  
Sbjct: 23  PMILSNLSVPLVALVDSSVIGHLPHAHQLGAVAVGGSLYTLLVWVMGFLRMGTTGFAAQA 82

Query: 76  QGEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAEGRVFELGLQYLQVLI 135
            G     + ++IL  GL+  L  A ++  I   +    L+       + EL   Y    +
Sbjct: 83  AGRNDGGALRQILLQGLLLALGFALLLGAIGVPLKGAALQLMQPSAELDELTRDYFHTRL 142

Query: 136 VGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIAWLQWELTGAAIATTL 195
            G    L S A+        +      +++   L N+ LD  F+  L W + GAA A+ +
Sbjct: 143 FGLPAALASYALIGWFLGTQNARAPLAILLTTNLINVVLDLWFVLGLDWGVAGAARASVI 202

Query: 196 AQVVVTLLGLAYFFSARANM--RLTRRCLRLEWHSLPKIFAIGVSSFFMYAYGSTMVALH 253
           A+    LLGLA    A A    RL  R LR  W S   + A+     F+ +    +V L 
Sbjct: 203 AEWSGALLGLALTRKALARYPGRLDTRALR-RWLSWRPLMAVN-RDIFLRSLALQLVFLL 260

Query: 254 NTLM-IEYGNA-VMVGAYAVMGYIVTIYYLTVEGIANGMQPLASYHFGARNYDHIRKLLR 311
            T+     G+A V   A  + G ++T + L  +G+A+ ++ LA +  GARN D +++++ 
Sbjct: 261 VTVQGTRLGDATVAANALLLNGLLLTAHAL--DGLAHAVEALAGHAIGARNRDALQRVMV 318

Query: 312 LAMGIAVLGGMAFVLVLNLFPEQAIAIFNSSDSELIAGAQMGIKLHLFAM--------YL 363
           +A G ++L  +AF L   L  +  I +   +D   +    +    +L A+         L
Sbjct: 319 VAGGWSLLASVAFGLFFLLGGQLFIQL--QTDIPEVRQTALTYLPYLAALPLIAVWSYLL 376

Query: 364 DGFLVVSAAYYQSTNRGGKAMFITVGNMSIMLPFLFILPQFFGLTGVWIALPISNIVLST 423
           DG  + +    +  N    +M + VG   + LP  ++L Q  G  G+W+A     ++   
Sbjct: 377 DGLFIGATRAREMRN----SMLLAVG---LTLPLGWLL-QGLGNHGLWLAFLSFMLMRGV 428

Query: 424 VVGIMLWR 431
            +G++  R
Sbjct: 429 CLGVLAQR 436