Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., Multi antimicrobial extrusion protein MatE from Pseudomonas syringae pv. syringae B728a

 Score = 82.8 bits (203), Expect = 2e-20
 Identities = 97/448 (21%), Positives = 182/448 (40%), Gaps = 28/448 (6%)

Query: 3   NRSIYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGIGM 62
           +RS +R+      P + + +   L  +VD   IGH   A  L  + V   +   +  +  
Sbjct: 10  HRSTHRRVWALATPMILSNISVPLVALVDSAVIGHLPHAHQLGAVAVGATLYTFLAWVMG 69

Query: 63  LVGVGTGALASIKQGEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAEGR 122
            + +GT   A+   G     + +RIL  GL+  + LA ++ VI    +   L        
Sbjct: 70  FLRMGTTGFAAQAAGRSDSAALRRILLQGLLLAVGLALLLGVIALPFSHLALTMMQPSAD 129

Query: 123 VFELGLQYLQVLIVGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIAWL 182
           + ++ L +    + G    L S A+        +      ++++    NI L+  F+  L
Sbjct: 130 LQQMTLDFFHTRLFGLPAALASYALVGWFLGAQNARAPLAILLVTNAVNIVLNLWFVMGL 189

Query: 183 QWELTGAAIATTLAQVVVTLLGLAYFFSARANM-----RLTRRCLRLEWHSLPKIFAIGV 237
            W + G+A A+ LA+    +LGL     AR  +     R+    LRL W +   + A+  
Sbjct: 190 DWGVVGSARASVLAEWTGVVLGL---LLARNTLRAWPGRIVWSALRL-WSNWRPLLAVNR 245

Query: 238 SSFFMYAYGSTMVALHNTLMIEYGNA-VMVGAYAVMGYIVTIYYLTVEGIANGMQPLASY 296
             F       +++ L        G+A V   A  + G ++T + L  +G+A+ ++ L  +
Sbjct: 246 DIFLRTLALQSVMFLITVQGARLGDATVAANALLLNGLLLTAHAL--DGLAHAVEALCGH 303

Query: 297 HFGARNYDHIRKLLRLAMGIAVLGGMAFVLVLNLFPEQAIAIFNSSDSELIAGAQMGIK- 355
             GAR+ D +R+ L +A G +++  + F L   L   Q      +   E+ A A M +  
Sbjct: 304 AIGARDRDTLRRSLVVAGGWSLISSVVFALFF-LVAGQGFVSLQTDIPEVRATAMMYLPY 362

Query: 356 ------LHLFAMYLDGFLVVSAAYYQSTNRGGKAMFITVGNMSIMLPFLFILPQFFGLTG 409
                 L +++  LDG  + +    +  N    AM  +   ++     L  L    G   
Sbjct: 363 LALMPLLAVWSYLLDGLFIGATRAREMRN----AMLFSAAGIAP----LAYLASSHGNHA 414

Query: 410 VWIALPISNIVLSTVVGIMLWRDVNKMG 437
           +W+      ++    +G + WR   + G
Sbjct: 415 LWLTFLAFTLLRGLSLGTIAWRLTRRDG 442