Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., multi anti extrusion protein MatE (RefSeq) from Shewanella amazonensis SB2B

 Score =  277 bits (709), Expect = 4e-79
 Identities = 153/422 (36%), Positives = 237/422 (56%)

Query: 1   MMNRSIYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGI 60
           M+   + R F RYT+PT+A+MLV G+Y  +DG+F+GH++G  GLAGI +A+PV   +  +
Sbjct: 7   MLEAPVSRLFWRYTLPTIASMLVTGIYVTIDGMFVGHFLGETGLAGIMLAYPVGALLYAV 66

Query: 61  GMLVGVGTGALASIKQGEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAE 120
           G L+G+G GAL SIK GEG    A+ +L      +LL A    ++    A   L W GAE
Sbjct: 67  GALIGMGAGALVSIKLGEGKTAKARELLGNAFSLVLLSALFFTLVGSVSARHILIWLGAE 126

Query: 121 GRVFELGLQYLQVLIVGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIA 180
           G V E    YL      C+F L S+A   LLRND  P   T +++ G + N  LDYLFI 
Sbjct: 127 GEVLESAHDYLFWYFALCIFPLISMAFSTLLRNDGKPAFVTWVLIAGGVINTLLDYLFIV 186

Query: 181 WLQWELTGAAIATTLAQVVVTLLGLAYFFSARANMRLTRRCLRLEWHSLPKIFAIGVSSF 240
              + L GA++AT L+Q V  LL L +FFS +  +R+    +RL+  +   I  +G+ S 
Sbjct: 187 VWDFGLAGASVATMLSQAVTGLLCLQHFFSGKTALRIDFEQMRLKLDNCLNISRVGLPSL 246

Query: 241 FMYAYGSTMVALHNTLMIEYGNAVMVGAYAVMGYIVTIYYLTVEGIANGMQPLASYHFGA 300
            M  Y S ++ LHNT ++  G  + V AY V+ Y    +YL  EGIA G QP+ S++ GA
Sbjct: 247 LMNLYLSIVLTLHNTALLWVGTPLHVAAYGVVSYTEAFFYLIFEGIALGSQPVLSFNAGA 306

Query: 301 RNYDHIRKLLRLAMGIAVLGGMAFVLVLNLFPEQAIAIFNSSDSELIAGAQMGIKLHLFA 360
              D +R+   LAM + +L     +L +   PE A+ IF   +  L   A  G++L+ + 
Sbjct: 307 GRMDRVRQTRNLAMAVTLLTAGLGLLFIYGRPEWALYIFAGDNPVLSPVAIEGMRLYFWG 366

Query: 361 MYLDGFLVVSAAYYQSTNRGGKAMFITVGNMSIMLPFLFILPQFFGLTGVWIALPISNIV 420
           +  +G ++V A+++Q+ N+  +A  +T   + ++   ++     FG+ GVW++L   + V
Sbjct: 367 LPFEGLILVGASFFQAINKPREASILTGTKLLLIAAVIYSFAWLFGVPGVWVSLACVSSV 426

Query: 421 LS 422
           L+
Sbjct: 427 LT 428