Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., Multi antimicrobial extrusion protein MatE (NCBI) from Rhodospirillum rubrum S1H

 Score =  134 bits (337), Expect = 6e-36
 Identities = 120/438 (27%), Positives = 201/438 (45%), Gaps = 17/438 (3%)

Query: 6   IYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGIGMLVG 65
           I R FV   +P    M + G+  VVDGIF+GH++G++ LA +++A+PV   +  +  L G
Sbjct: 18  IGRLFVSNALPMAVVMSMGGVLNVVDGIFVGHFIGSDALAAVSLAFPVAMVLSALTTLTG 77

Query: 66  VGTGALASIKQGEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAEG--RV 123
            G  +L +   G G   +A RI A     L+L   +  V+LW +    L    A G  +V
Sbjct: 78  GGMSSLMARYLGAGDRGAAGRIFAE-THGLVLAISVGLVVLWAVVGAALVDSMAAGNPKV 136

Query: 124 FELGLQYLQVLIVGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIAWLQ 183
             L   YLQ++I+G    L        LRN+    L   L V+  L NI  + L I  L 
Sbjct: 137 AGLAQDYLQIMILGAPAQLMLGVHADALRNEGRAGLIAALSVLVNLFNIGANGLGIVVLG 196

Query: 184 WELTGAAIATTLAQVVVTLLGLAYFFSARANMR--LTRRCLRLE-----WHSLPKIFAIG 236
             ++G+A+ T  AQ     LGLA     R + +  L    LR       W  + ++    
Sbjct: 197 LGISGSALGTVAAQA----LGLALVIGVRGHSKGLLPLSVLRARNWLGAWSQIIRLGLPL 252

Query: 237 VSSFFMYAYGSTMVALHNTLMIEYGNAVMVGAYAVMGYIVTIYYLTVEGIANGMQPLASY 296
             SF   A  +++V +   L        +V AY V+  ++   +L    IA   Q +   
Sbjct: 253 CLSFIGIAMVASVVIVSLRLSAGTDYNALVAAYGVVTRLLGFAFLPQMAIALATQSITGN 312

Query: 297 HFGARNYDHIRKLLRLAMGIAVLGGMAFVLVLNLFPEQAIAIFNSSDSELIAGAQMGIKL 356
           + GA   D  R  LRLA+G A L  +  VL   +F    +  + S D  +I      ++ 
Sbjct: 313 NAGAGRTDRARAALRLALGAAFLWCLPVVLA-GVFAGTTLGSWFSDDPAVIDAVAEILRP 371

Query: 357 HLFAMYLDGFLVVSAAYYQSTNRGGKAMFITVGNMSIMLPFLFI-LPQFFGLTGVWIALP 415
            +      G ++V A Y  +  + G+   +T+    ++ P L + L   FG++ +W+A P
Sbjct: 372 MMLFYAASGPVLVLALYVHALGQPGRTAALTLVKPWLLTPLLILALSIGFGVSEMWLAFP 431

Query: 416 ISNIVLSTVVGIMLWRDV 433
           +++ ++  ++ +M+ R+V
Sbjct: 432 MADAII-LMLAVMIGRNV 448