Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., MATE efflux family protein (RefSeq) from Shewanella loihica PV-4

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 92/442 (20%), Positives = 180/442 (40%), Gaps = 20/442 (4%)

Query: 1   MMNRSIYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGI 60
           ++++ I R  +  ++P +  +L    + +VD  FI   +G E LA I+  +PV  T++  
Sbjct: 7   LLSQPIGRVLLNMSLPNLIGILTILGFSLVDTFFISQ-LGTEALAAISFTFPV--TLIVS 63

Query: 61  GMLVGVGTGALASIKQ--GEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQG 118
            + +G+G G   ++ +  G G+   AK  L   L+    L   ++++            G
Sbjct: 64  SIAIGIGAGVSTNLGRLIGSGNSPKAKVFLHDALLITFWLIAALSLLGSLFIGPLFTLLG 123

Query: 119 AEGRVFELGLQYLQVLIVGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLF 178
           A      L   Y+ +  +G    +  +     LR          +M + A+ N+ LD L 
Sbjct: 124 ANDDSLPLIRDYMFLWYLGAPLLVLLMVGNQGLRATGDTKSPAKIMALAAVINLVLDPLL 183

Query: 179 IAWL----QWELTGAAIATTLAQVVVTLLGLAYFFSARANM----RLTRRCLRLEWHSLP 230
           I  L    + E+ GAAIAT ++ VV   L   Y    + N+          +   W  L 
Sbjct: 184 IFGLGPFPRLEIQGAAIATLISWVVALSLS-GYLLIIKRNLVDFAEFNLERIHCNWRQLA 242

Query: 231 KIFAIGVSSFFMYAYGSTMVALHNTLMIEYGNAVMVGAYAVMGYIVTIYYLTVEGIANGM 290
            I         +    + ++      M+   +   V A+     + ++  + V  +++ +
Sbjct: 243 HIAQPAALMNLLNPVANAII----MAMLARIDHSAVAAFGAGTRLESVLLIAVMALSSSL 298

Query: 291 QPLASYHFGARNYDHIRKLLRLAMGIAVLGGMAFVLVLNLFPEQAIAIFNSSDSELIAGA 350
            P  + + GA   +  R  L L++   ++      L L L       +F S D ++I   
Sbjct: 299 VPFIAQNLGAGQTERARDALMLSLRFVLVFQTLIYLPLALMATPIAQLF-SKDPQVIEWL 357

Query: 351 QMGIKLHLFAMYLDGFLVVSAAYYQSTNRGGKAMFITVGNMSIMLPFLFILPQFF-GLTG 409
              I     A    G ++++A    + +R   ++ + V  + ++L  L  L  +  G+ G
Sbjct: 358 SFYIIALPAAYGPLGMVILTATSLNAYHRPMSSLVLNVCRLFLLLLPLAALGSYLGGVKG 417

Query: 410 VWIALPISNIVLSTVVGIMLWR 431
           + +ALPI+N V+     I+  R
Sbjct: 418 LLLALPITNAVMGIACYILASR 439