Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., MATE family efflux transporter from Methanococcus maripaludis S2

 Score =  203 bits (517), Expect = 8e-57
 Identities = 120/429 (27%), Positives = 216/429 (50%), Gaps = 4/429 (0%)

Query: 6   IYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGIGMLVG 65
           + +  V+ ++P +  ML+  LY +VDG FIG +VG     GI + +P    I+  G+  G
Sbjct: 13  VKKLLVKLSVPAIIGMLIMALYNIVDGFFIGRWVGTAAFTGIALIFPFQMMIMAFGVTFG 72

Query: 66  VGTGALASIKQGEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAEGRVFE 125
           +G  +L S K GEG+ D A++     + S+L+L+ ++ ++        L   G    +F 
Sbjct: 73  IGGSSLLSRKLGEGNLDFARKAGGNAISSVLILSVLITIVGVVFMVPILNLLGTSADIFP 132

Query: 126 LGLQYLQVLIVGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIAWLQWE 185
               Y ++++ G +F    +A   L+R +    +A   MV+ A+ NI LD + I      
Sbjct: 133 YAKDYYEIILYGTIFNSYLVAANNLVRAEGMAKVAMFAMVVPAIINIILDPILIIVFNMG 192

Query: 186 LTGAAIATTLAQVVVTLLGLAYFFSARANMRLTRRCLRLEWHSLPKIFAIGVSSFFMYAY 245
           + GAAIAT L+Q++  +  L + F    +++       +    L +   IG S F     
Sbjct: 193 IKGAAIATVLSQIIGVIYILKHQFGKNTSIKYAMNDFLINLKILKETVFIGASEFAKLII 252

Query: 246 GSTMVALHNTLMIEYGNAVMVGAYAVMGYIVTIYYLTVEGIANGMQPLASYHFGARNYDH 305
            S ++ L N L+  YG  + +  Y V+  I  +  + V GI  G QP+  Y++G    + 
Sbjct: 253 SSILLILGNNLLGIYGGDIAIAIYGVIMRIAMLLLMPVLGIVQGFQPIVGYNYGKGQLNR 312

Query: 306 IRKLLRLAM-GIAVLGGMAFVLVLNLFPEQAIAIFNSSDSELIAGAQMGIKLHLFAMYLD 364
           + + ++LA+ G + L  + F+LV+ +FPE+ I IF  +D E+I+      ++     +L 
Sbjct: 313 VSESIKLALVGTSGLCLLGFILVM-IFPEKFIQIF-ITDPEVISQGVFATRIFFMFSFLI 370

Query: 365 GFLVVSAAYYQSTNRGGKAMFITVGNMSI-MLPFLFILPQFFGLTGVWIALPISNIVLST 423
           G  +     YQS  +   A  I+    ++ ++P L ILP FFGL G+W + PI +++  T
Sbjct: 371 GAQMTIGGLYQSLGKAKPAFIISCARQTLFLMPALIILPLFFGLNGIWFSFPIGDLLGFT 430

Query: 424 VVGIMLWRD 432
           +   ++++D
Sbjct: 431 LASGIIFKD 439