Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., MATE family efflux transporter from Methanococcus maripaludis JJ

 Score =  244 bits (624), Expect = 3e-69
 Identities = 133/436 (30%), Positives = 248/436 (56%), Gaps = 3/436 (0%)

Query: 3   NRSIYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGIGM 62
           N  I    +RY IP++A  ++ G+Y ++DGIFIG  VGAEGLAG+  ++PV+  I  IG+
Sbjct: 9   NEKINNLMIRYVIPSIAGTVIIGIYGIIDGIFIGRTVGAEGLAGVTFSFPVLIAISSIGV 68

Query: 63  LVGVGTGALASIKQGEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAEGR 122
           ++G G+ A+ SI  G+     A  IL T L  ++L++ I+    + + D  + +      
Sbjct: 69  MIGAGSSAIISISLGKKDYKKASCILKTALTYIILISLIITCFGYLLIDPVISFMNLSKN 128

Query: 123 VFELGLQYLQVLIVGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIAWL 182
           +      Y +++I+G +  + +I++  +LRND  P  + +++ + ++ NI LDY+ I   
Sbjct: 129 LEIYVAGYSKIIILGAIAQIFAISLDPILRNDGFPKKSMIILALMSIFNIILDYILIVIF 188

Query: 183 QWELTGAAIATTLAQVVVTLLGLAYFFSARANMRLTRRCLRLEWHSLPKIFAIGVSSFFM 242
            + + GAA AT LAQ + ++L L +F S ++N+++ +    LE+ ++ +I   G S F M
Sbjct: 189 NFGVIGAAAATVLAQGLGSILYLKHFLSGKSNVKIGKNSPFLEFSTIKRIAKTGFSPFIM 248

Query: 243 YAYGSTMVALHNTLMIEYGNAVMVGAYAVMGYIVTIYYLTVEGIANGMQPLASYHFGARN 302
                 ++ +HN   + YG+ + V AY ++ YI +  Y+   GI+ G+QPL SY+ GA+ 
Sbjct: 249 ELAFGILMIVHNIQFMRYGSPLDVSAYGIVIYITSFLYMVYLGISEGVQPLISYNHGAKK 308

Query: 303 YDHIRKLLRLAMGI-AVLGGMAFVLVLNLFPEQAIAIFNSSDSELIAGAQMGIKLHLFAM 361
           ++ + ++L+ A+ + A+LG  +F+ +L  FP   I IFN  D+ LI    +G+++H FA+
Sbjct: 309 FNRVFEILKKAVFVNAILGICSFLTILK-FPNLLIKIFNPHDTNLITTTTIGLEIHNFAI 367

Query: 362 YLDGFLVVSAAYYQSTNRGGKAMFITVGNMSI-MLPFLFILPQFFGLTGVWIALPISNIV 420
            + G  +V   Y+ +T +   A F+++G   I +LP + + P + G+ G+W +   S  +
Sbjct: 368 LIMGVSMVLMMYFLATEQPKIAGFLSLGRTLIFILPAIILFPIYLGIKGIWWSTVFSEYL 427

Query: 421 LSTVVGIMLWRDVNKM 436
              +    + ++  K+
Sbjct: 428 SFIITIYFITKEFKKI 443