Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., conserved hypothetical protein, putative membrane protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 90.5 bits (223), Expect = 1e-22
 Identities = 90/412 (21%), Positives = 166/412 (40%), Gaps = 15/412 (3%)

Query: 13  YTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGIGMLVGVGTGALA 72
           +T+P +   L+   Y +VD   +G ++G   LA +  +  V+  ILG       G G   
Sbjct: 19  FTLPLLFGNLLQQTYSLVDAAIVGKFLGINALASVGASTSVVFLILGFCNGCCGGFGIPV 78

Query: 73  SIKQGEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAEGRVFELGLQYLQ 132
           + K G     + +  ++  L   ++++ ++A+       D L+       +FE    YL 
Sbjct: 79  AQKFGARDYSTMRSYVSVSLQLAVVMSVVIAIFTSIYCADILKMMRTPENIFEGAYAYLL 138

Query: 133 VLIVGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIAWLQWELTGAAIA 192
           V  +G   T     +  ++R           +V+  + NI LD   I  L W + GAAIA
Sbjct: 139 VTFIGIPCTFFYNLLSSIIRALGDSKTPFYFLVLATVLNIILDLFCILVLGWGVMGAAIA 198

Query: 193 TTLAQVVVTLLGLAYFFSARANMRLTRRCLRLEWHSLPKIFAIGVS---SFFMYAYGSTM 249
           T  +Q V   L   Y +     +R T +  + +      + +IGV     F + A GS M
Sbjct: 199 TVFSQGVSAFLCYVYMYRKFDILRGTPKERKYQSKLAKTLLSIGVPMGLQFSITAIGSIM 258

Query: 250 VALHNTLMIEYGNAVMVGAYAVMGYIVTIYYLTVEGIANGMQPLASYHFGARNYDHIRKL 309
           +   N  +        V A+     I   +   +E +   M   +  ++GA   + I   
Sbjct: 259 LQSANNAL----GTACVAAFTSAMRIKMFFLCPLESLGMAMATFSGQNYGAGKPERIWSG 314

Query: 310 LRLAMGIAVLGGMAFVLVLNLFPEQAIAIF-NSSDSELIAGAQMGIKLHLFAMYLDGFLV 368
           ++ +  + V+      L+L L  +    IF + S+ E++   ++ + + +    + G L 
Sbjct: 315 IKASTLMMVIYTAVTFLILMLGAKSFALIFVDPSEIEILEKTELFLHISVSFFPMLGLLC 374

Query: 369 VSAAYYQSTNRGGKAMFITVGNM-SIMLPFLFILPQF------FGLTGVWIA 413
           +     Q       AMF  V  M + +L  ++ +P F      +G    WIA
Sbjct: 375 ILRYTIQGVGYTNLAMFSGVSEMIARILVSIYAVPAFGFIAVCYGDPMAWIA 426