Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 451 a.a., putative transmembrane cation efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  181 bits (459), Expect = 4e-50
 Identities = 121/426 (28%), Positives = 209/426 (49%), Gaps = 9/426 (2%)

Query: 10  FVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGIGMLVGVGTG 69
           F +  +PTV  M+ + ++ + DGIF+G  +G++ LA +N+  P+     GIG++ GVG  
Sbjct: 16  FRKLLVPTVLGMVFSAIFVITDGIFVGKGIGSDALAAVNITAPLFMIATGIGLMFGVGGS 75

Query: 70  ALASIKQGEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAEGRVFELGLQ 129
            +ASI   +G   +A   +   L+    +  +++ + +          G+  R+  L ++
Sbjct: 76  VVASIYLSQGKRKAANINITQALVFSTFIVLVMSALCFCFVGPLGCLLGSSDRLLPLVIE 135

Query: 130 YLQVLIVGCLF-TLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIAWLQWELTG 188
           Y+   +   +F  L S  M F +R D SPN A +   I A+ NI  DY+FI    W + G
Sbjct: 136 YMIWYLPFLVFYELLSTGM-FFIRLDGSPNYAMMCNAIAAIFNIIFDYIFIFEFGWGMMG 194

Query: 189 AAIATTLAQVVVTLLGLAYFFSARANMRLTR-----RCLRLEWHSLPKIFAIGVSSFFMY 243
           AA AT+L  VV  L+ + Y      N+ L R     + L L   +   +  +G S+F   
Sbjct: 195 AAFATSLGTVVGGLMTVIYLTRFSRNIHLHRIKLSLKSLMLTLRNGGYMIKLGTSAFISE 254

Query: 244 AYGSTMVALHNTLMIEYGNAVMVGAYAVMGYIVTIYYLTVEGIANGMQPLASYHFGARNY 303
           A  + M+ L N + I +     V A+++  Y   I ++    IA   QP+ SY+FGA   
Sbjct: 255 ASIACMMFLGNYVFIHHLGEDGVAAFSIACYFFPIIFMVYNAIAQSAQPIISYNFGAGQP 314

Query: 304 DHIRKLLRLAMGIAVLGGMAFVLVLNLFPEQAIAIFNSSDSELIAGAQMGIKLHLFAMYL 363
           D +RK L LA+  A++ G++F ++  L  +  +++F          A  GI         
Sbjct: 315 DRVRKALHLAIRTALICGISFFIITFLCRQNIVSLFIDRSCPAFDIAVNGIPYFGVGFIF 374

Query: 364 DGFLVVSAAYYQSTNRGGKAMFIT-VGNMSIMLPFLFILPQFFGLTGVWIALPISNIVLS 422
               ++   YYQS  RG +A  IT +  +  ML   F+LP   G+ G+W+A+ ++ ++ +
Sbjct: 375 FAANMIGIGYYQSIRRGQRATIITLLRGVVFMLIGFFVLPLVLGVPGIWLAVSLAELLTT 434

Query: 423 T-VVGI 427
             ++GI
Sbjct: 435 LYIIGI 440