Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., MATE efflux family protein (RefSeq) from Shewanella sp. ANA-3

 Score = 72.4 bits (176), Expect = 3e-17
 Identities = 96/453 (21%), Positives = 182/453 (40%), Gaps = 44/453 (9%)

Query: 1   MMNRSIYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGI 60
           ++N +  RQ +   +P + + +   L  +VD   IGH   A  L G+ +   +I  I+ +
Sbjct: 12  LLNGTKNRQLLALALPMILSNITVPLLGLVDTAVIGHLSDAYYLGGVALGSTIITLIIWL 71

Query: 61  GMLVGVGTGALASIKQGEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAE 120
              + + T  L +   G    ++  ++L  G M    L   V ++   + +  L    A 
Sbjct: 72  LGFLRMATTGLVAQAYGANDLNAQLKLLVQGAMLATGLGIAVILLQIPILNLSLSLSEAS 131

Query: 121 GRVFELGLQYLQVLIVGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIA 180
             V     +Y QV +    F L ++ M   L     P  A   ++   + NI LD LF+ 
Sbjct: 132 VEVERYCREYFQVRVWSTPFALLNLVMLGWLLGRQQPKAAMWQLIFANVANIILDVLFVI 191

Query: 181 WLQWELTGAAIATTLAQVVVTLLGL----------AYFFSARANMRLT----RRCLRLEW 226
              W++ GAA+A+  A +    + L          + F      + LT     + LRL  
Sbjct: 192 GFGWDVKGAALASVCADITAFSVALYMVLQQLKLSSQFTFGHLRIHLTFVGYGQLLRLNT 251

Query: 227 HSLPKIFAIGVSSFFMYAYGSTMVALHNTLMIEYGNAVMVGAYAVMGYIVTIYYLTVEGI 286
               +   +  +  FM  +G+ +    NT+     NAV++    ++ Y        ++GI
Sbjct: 252 DIFIRSLCLQAAFAFMTFHGAGLG--DNTVA---ANAVLLNLLLLIAY-------ALDGI 299

Query: 287 ANGMQPLASYHFGARNYDHIRKLLRLAMGIAVLGGMAFVLVLNLFPEQAIAIFNSSDSEL 346
           A   +      +G +    +R+ + LA   + +  + F L+  LF ++ I +  + D E+
Sbjct: 300 AYYAEAEVGKAYGQKRTQPLREAVLLAWCWSAISALGFSLIFYLFGDRIIGLLTNID-EV 358

Query: 347 IAGAQMG------IKLHLFAMYLDGFLVVSAAYYQSTNRGGKAMFITVGNMSIMLPFLFI 400
              AQ+       + L  F+ YL   + + AA        GK M     N  I+  F   
Sbjct: 359 RTTAQIYLPWLILLPLWSFSSYLFDGVYIGAA-------KGKVM----RNSMIIATFGAF 407

Query: 401 LPQFFGLTGVWIALPISNIVLSTVVGIMLWRDV 433
            P ++ L  +  +   ++ + + +   ML R +
Sbjct: 408 FPAWYLLQSLLPSEQANHALWAAMTAFMLTRSL 440