Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., MATE efflux family protein (RefSeq) from Shewanella sp. ANA-3

 Score = 73.9 bits (180), Expect = 9e-18
 Identities = 93/460 (20%), Positives = 192/460 (41%), Gaps = 32/460 (6%)

Query: 1   MMNRSIYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGI 60
           +++  I R  +  ++P +  ++    + + D  FI   +G E LA I+  +PV  T++  
Sbjct: 7   LLSAPIGRVLLNMSLPNLIGIMTILGFSLADTFFISQ-LGTEALAAISFTFPV--TLIIS 63

Query: 61  GMLVGVGTGALASIKQ--GEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQG 118
            + +G+G G   ++ +  G G+   AK  L   L+   +L   ++ +            G
Sbjct: 64  SIAIGIGAGVSTNLGRLIGSGNAPRAKVFLHDALLLTFILIASLSALGSIFIKPLFSLLG 123

Query: 119 AEGRVFELGLQYLQVLIVGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLF 178
           A      L   Y+    VG    +  +     LR+        ++M + A+ N+ LD L 
Sbjct: 124 ANDTSLPLIHDYMMYWYVGAPLLVLLMVGNQGLRSTGDTRSPAMIMALAAIINLILDPLL 183

Query: 179 IAWL----QWELTGAAIATTLAQVVVTLLGLAYFFSARANMRLTRRCLRLEWHSLP-KIF 233
           I  +    + E+ GAAIAT  + ++   L   Y    + NM        LEW +      
Sbjct: 184 IFGIGPFPRLEIQGAAIATLFSWLIALSLS-GYLLIIKRNM--------LEWAAFDIDRM 234

Query: 234 AIGVSSFFMYAYGSTMVALHNTL-------MIEYGNAVMVGAYAVMGYIVTIYYLTVEGI 286
               S     A  + ++ L N L       M+ + +   V A+     + ++  + V  +
Sbjct: 235 RANWSKLAHIAQPAALMNLINPLANAVIMAMLAHIDHSAVAAFGAGTRLESVLLIVVMAL 294

Query: 287 ANGMQPLASYHFGARNYDHIRKLLRLAMGIAVLGGMAFVLVLNLFPEQAIAIFNSSDSEL 346
           ++ + P  + + GA      ++ L L++    +      + L  F +    +F S+D ++
Sbjct: 295 SSSLMPFIAQNLGAGQTQRAKQALLLSLKFIFVFQTLLYIPLAFFAQPLAHLF-STDPQV 353

Query: 347 IAGAQMGIKLHLFAMYLDGFLVVSAAYYQSTNRGGKAMFITVGNM-SIMLPFLFILPQFF 405
           +      I +   A    G +++ A    + +R   ++ I +  +  +MLP   +     
Sbjct: 354 LEWLSFYILVLPCAYGPLGIVIIFATALNAYHRPMSSLVINLCRLVLLMLPLAALGSYID 413

Query: 406 GLTGVWIALPISNIVLSTVVGIMLWRDVNKMGKPTQVSYA 445
           G+ G+ +ALPI+N+++    GI  +    ++ +P +V+ A
Sbjct: 414 GVKGLLLALPITNLLM----GIACYYLAQRICEPAKVTTA 449