Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., multi anti extrusion protein MatE (RefSeq) from Shewanella sp. ANA-3

 Score =  273 bits (699), Expect = 6e-78
 Identities = 146/422 (34%), Positives = 241/422 (57%), Gaps = 2/422 (0%)

Query: 1   MMNRSIYRQFVRYTIPTVAAMLVNGLYQVVDGIFIGHYVGAEGLAGINVAWPVIGTILGI 60
           ++   I + F RYTIPT+A+MLV G+Y  +DGIF+GHY+G  GLAG+ +A+PV   +  +
Sbjct: 13  LLQEPIAKLFWRYTIPTIASMLVTGVYVTIDGIFVGHYLGETGLAGMMLAYPVGAILYAV 72

Query: 61  GMLVGVGTGALASIKQGEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAE 120
           G ++G+G+ AL SI  G+GH   A+++L       LL     A+I    + D L   GAE
Sbjct: 73  GAMIGMGSAALVSINLGQGHVAKARKLLGNAFSLCLLAGAFFALIGGIFSRDILIALGAE 132

Query: 121 GRVFELGLQYLQVLIVGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIA 180
           G + E   +YL      C F + S+A   LLRND  P++ T ++++G + N  LD+LFI 
Sbjct: 133 GEILENANEYLFWYFALCHFPIISMAFTTLLRNDGRPSMVTFVLILGGVLNTFLDWLFIV 192

Query: 181 WLQWELTGAAIATTLAQVVVTLLGLAYFFSARANMRLTRRCLRLEWHSLPKIFAIGVSSF 240
              + L GAAIAT L+Q V  LL L +FF AR  +++    ++L+  +   I  +G+ SF
Sbjct: 193 VFPFGLAGAAIATMLSQAVTGLLCLQHFFGARTQLKINLEQMKLKLDNCLNIARVGLPSF 252

Query: 241 FMYAYGSTMVALHNTLMIEYGNAVMVGAYAVMGYIVTIYYLTVEGIANGMQPLASYHFGA 300
            M  Y S ++ LHNT  +  G  + V AY V+ Y    +YL  EGIA G QP+ S++ GA
Sbjct: 253 LMNLYLSIVLTLHNTAFLWVGGPLHVAAYGVVSYTEAFFYLIFEGIALGTQPIYSFNAGA 312

Query: 301 RNYDHIRKLLRLAMGIAVL-GGMAFVLVLNLFPEQAIAIFNSSDSELIAGAQMGIKLHLF 359
             +D +++   +A G+ +L  G+  VL+ +  PE  + +F   +  L   A  G++ + +
Sbjct: 313 GRFDRVKQARNIAFGMTLLTAGLCLVLIYSR-PEWLVYLFAGDNPSLTPVAIEGMRWYFW 371

Query: 360 AMYLDGFLVVSAAYYQSTNRGGKAMFITVGNMSIMLPFLFILPQFFGLTGVWIALPISNI 419
            + ++G ++V A+++Q+ N   +A  +T   + ++   ++     FG+ GVW++L   + 
Sbjct: 372 GLPMEGLILVGASFFQAINCSKQASILTGAKLLLIAAIIYCFAWAFGVIGVWVSLATCST 431

Query: 420 VL 421
           +L
Sbjct: 432 ML 433