Pairwise Alignments

Query, 445 a.a., MATE family efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., MATE efflux family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  102 bits (255), Expect = 2e-26
 Identities = 103/439 (23%), Positives = 193/439 (43%), Gaps = 21/439 (4%)

Query: 17  TVAAMLVNGLYQV--VDGIFIGHYVGAEGLAGINVAWPVIGTILGIGMLVGVGTGALASI 74
           + AA+ ++ L+ V  +D  F+      E  A +  A  +      IG+ + +  GAL S 
Sbjct: 20  STAAVGISALFVVDLLDIFFLSLLGEHELAAAVGYAGSISFFTTSIGIGLSIALGALVSR 79

Query: 75  KQGEGHPDSAKRILATGLMSLLLLAPIVAVILWFMADDFLRWQGAEGRVFELGLQYLQVL 134
             G    + AKR+L        L++  V+V++     + +   GA G   EL   YL +L
Sbjct: 80  SIGAKDVELAKRLLLNSAAVTTLISLFVSVVVTCFIPELVTLVGASGHTAELAESYLYIL 139

Query: 135 IVGCLFTLGSIAMPFLLRNDHSPNLATLLMVIGALTNIALDYLFIAWLQWELTGAAIATT 194
           +    F   ++A+   LR      L+ +  + G   N  LD +FI      + GAA+A+ 
Sbjct: 140 VPSLPFICLAMALGGALRAVGDAKLSMMSTLAGGGVNAVLDPIFIFLFAMGIEGAALASV 199

Query: 195 LAQVVVTLLGLAYFFSARANMRLTRRCLRLEWHSLPKIFAIGVSSFFMYAYGSTMVALHN 254
           LA++ V +  +A       +  L +         L  IFAI   +           A   
Sbjct: 200 LARIAVFI--IAGRGVVVKHQLLGKFNFSYFVADLKPIFAIAGPAMLTNIATPIGNAFVT 257

Query: 255 TLMIEYGNAVMVGAYAVMGYIVTIYYLTVEGIANGMQPLASYHFGARNYDHIRKLLRLAM 314
             + ++G+A + G +AV+G ++ + +  +  ++  + P+   +FGA  +D +R+ L  A+
Sbjct: 258 RAIADFGDAYVAG-WAVLGRLIPVTFGMIFALSGAIGPIVGQNFGAGRFDRVRESLTKAI 316

Query: 315 GIAVLGGMAFVLVLNLFPEQAIAIFN-SSDSELIAGAQMGIKLHLFAMYLDGFLVVSAAY 373
               L  +   L+L L   Q +++F+   DS  +        +  F  Y+  F   S   
Sbjct: 317 QFCTLYVVVMSLLLFLLKSQVVSLFDMKGDSAAL--------IEFFCSYIAVFFTFSGIL 368

Query: 374 Y---QSTNRGGKAMFITVGNMSI----MLPFLFILPQFFGLTGVWIALPISNIVLSTVVG 426
           +    S N  GKA + T+ N+       +PF+++  Q+ G+ GV I   + +I+   +  
Sbjct: 369 FVANASFNNLGKAKYSTLFNVGKATLGTVPFVYLGAQWGGVYGVLIGQVLGSILFGVMGV 428

Query: 427 IMLWRDVNKMGKPTQVSYA 445
            + +R V+K+   ++ S A
Sbjct: 429 WVAYRLVDKVAVASRASAA 447