Pairwise Alignments

Query, 709 a.a., polyribonucleotide nucleotidyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 701 a.a., Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) from Pseudomonas fluorescens FW300-N2E2

 Score =  843 bits (2179), Expect = 0.0
 Identities = 441/703 (62%), Positives = 537/703 (76%), Gaps = 8/703 (1%)

Query: 5   PVVKTFQYGNHTVTLETGVMARQATAAVMATMDD-TAVFVSVVGKKEAVVGQDFFPLTVN 63
           PV+K FQ+G  TVTLETG +ARQA+ AV+ T+DD  +V V+VVG K+A  G+ FFPL+V+
Sbjct: 3   PVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVSVLVTVVGAKQADPGKGFFPLSVH 62

Query: 64  YQERTYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPDGFTNEVQVIATVVSVNP 123
           YQE+TYAAGKIPGGFFKREGRPSE ETL +RLIDRPIRPLFP+GF NEVQV+ TVVS + 
Sbjct: 63  YQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVSTSK 122

Query: 124 DVQPDIISMIGTSAALAISGLPFNGPIGAARVG-HIDGQLVLNPSEKELKQSRLDLVVAG 182
              PDI +MIGTSAALAISG+PF+GPIGAARV  H     +LNP+ ++LK S LD+VVAG
Sbjct: 123 KTDPDIAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLKASSLDMVVAG 182

Query: 183 TDNAVLMVESEAQILTEEEMLAAVVFGHDQQQAVIKAINEFAAEVATPAWEWVAPAENTE 242
           T  AVLMVESEA+ LTE++ML AV+F HD+ Q VI A+ E AAE A P W W   AE TE
Sbjct: 183 TSEAVLMVESEAKELTEDQMLGAVLFAHDEFQVVINAVKELAAEAAKPTWTWAPQAEATE 242

Query: 243 LKAKVAALAETRLVEAYQITEKMARYDRIHEISAEVTAALLAENEALDTKEIHTIFHDLE 302
           L   + A     + +AY IT K  RY R+ E+  +V A L  E       ++   F ++E
Sbjct: 243 LLGAIRAEFGEAISQAYTITVKADRYARLGELKDQVVAKLSGEEGQPSASDVKAAFGEIE 302

Query: 303 KTVVRRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQALVTATLGTQRD 362
              VR +I+ G PRIDGR+   VR L++  GVLP+THGSALFTRGETQALV ATLGT RD
Sbjct: 303 YRTVRENIVNGKPRIDGRDTRTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTARD 362

Query: 363 AQIIDELTGEKKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGIAAVMPSPEEF 422
           AQ++D L GEKKD F+LHYNFPP+ VGE G +G   RREIGHGRLA+R + A++P+ + F
Sbjct: 363 AQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAADVF 422

Query: 423 PYTVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEENDFVVLSDI 482
           PYT+RVVSEITESNGSSSMASVCG+SLALMDAGVP+KA VAGIAMGLVKE   F VL+DI
Sbjct: 423 PYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAVLTDI 482

Query: 483 LGDEDHLGDMDFKVAGTATGVTALQMDIKIEGITKEIMQIALNQAKGARLHILSVMDQAI 542
           LGDEDHLGDMDFKVAGTA GVTALQMDIKI+GIT+EIM+IAL QA  ARL+IL  M+Q I
Sbjct: 483 LGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNQII 542

Query: 543 SAARSDISEFAPRIHTMKISVEKIKDVIGKGGAVIRQLTEETGTTIEIEDDGTIKIAATD 602
             +R+++SE AP +  MKI  +KI+DVIGKGGA IR + EET  +I+IEDDG+IKI    
Sbjct: 543 GQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFGET 602

Query: 603 GDQAKEAIRRIQEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRVEK 662
            + A+ A +R+  ITAE E+G IY GKV R+ DFGAFV ILPGKDGLVHIS ++D RVEK
Sbjct: 603 KEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARVEK 662

Query: 663 VSDYLTEGQEVQVKVLEIDRQGRVRLSMKEAVETSDAAAAEVA 705
           V+D L EGQEV+V VL++D +GR++LS+K      D AAA+ +
Sbjct: 663 VTDILKEGQEVEVLVLDVDNRGRIKLSIK------DVAAAKAS 699