Pairwise Alignments

Query, 709 a.a., polyribonucleotide nucleotidyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 716 a.a., polynucleotide phosphorylase/polyadenylase from Synechococcus elongatus PCC 7942

 Score =  616 bits (1588), Expect = e-180
 Identities = 339/712 (47%), Positives = 465/712 (65%), Gaps = 13/712 (1%)

Query: 8   KTFQYGNHTVTLETGVMARQATAAVMATMDDTAVFVSVVGKKEAVVGQDFFPLTVNYQER 67
           K+  +    + LE G+ A QA  +V+ +  DTAV V+   +  A  G DF PLTV+Y+ER
Sbjct: 6   KSLSFDGRDIRLELGLFAPQAGGSVLISSGDTAVLVAAT-RSTAREGIDFLPLTVDYEER 64

Query: 68  TYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPDGFTNEVQVIATVVSVNPDVQP 127
            YAAG+IPGGF +REGRP E  TL +RLIDRP+RPLFP    +++QV+AT +S++  V P
Sbjct: 65  MYAAGRIPGGFLRREGRPPERATLTSRLIDRPLRPLFPSWLRDDLQVVATTLSMDETVPP 124

Query: 128 DIISMIGTSAALAISGLPFNGPIGAARVGHIDGQLVLNPSEKELKQSRLDLVVAGTDNAV 187
           D++++ G S A  ++ +PF GP+ A RVG +    ++NP+ +E+++  LDLVVAGT   V
Sbjct: 125 DVLAVTGASIATLVAKIPFYGPMAAVRVGLVGDDFIINPTYREIEKGDLDLVVAGTPAGV 184

Query: 188 LMVESEAQILTEEEMLAAVVFGHDQQQAVIKAINEFAAEVATPAWEWVAPAENTELKAKV 247
           +MVE+ A  L E +++ A+ FG++  Q +IKA     AE+        AP  +  L+  V
Sbjct: 185 IMVEAGANQLPEADVIEAIDFGYEAVQELIKAQQSLLAELGIEQILPEAPNADNTLENFV 244

Query: 248 AALAETRLVEAYQI-----TEKMARYDRIHEISAEVTAALLAENE-----ALDTKEIHTI 297
              A + + +  Q      +E+ A  D +     E  AAL  E+      A + K +   
Sbjct: 245 RDRASSGVQQVLQHFSFTKSERDAALDEVKASVVEAIAALPEEDPVRSVTAAEPKALGNT 304

Query: 298 FHDLEKTVVRRSIIAGNPRIDGREKDMVRALDVRTGVLP-RTHGSALFTRGETQALVTAT 356
           F  L KT++R+ I+    R+DGR+ D VR +  + G+LP R HGS LF RG TQ L  AT
Sbjct: 305 FKALTKTLMRQQILRDGVRVDGRKLDQVRPISSQVGLLPPRVHGSGLFQRGLTQVLSIAT 364

Query: 357 LGTQRDAQIIDELTGEKKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGIAAVM 416
           LGT  DAQ +D+L  + +  +L HYN PPY VGET  + SP RREIGHG LA+R +  V+
Sbjct: 365 LGTPGDAQELDDLHPDTQKRYLHHYNMPPYSVGETRPMRSPGRREIGHGALAERALLPVL 424

Query: 417 PSPEEFPYTVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEENDF 476
           PS EEFPY +RVVSE+  SNGS+SM SVCGS+LALMDAGVPIK  V+G AMGL++E +++
Sbjct: 425 PSKEEFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPIKKPVSGAAMGLIREGDEY 484

Query: 477 VVLSDILGDEDHLGDMDFKVAGTATGVTALQMDIKIEGITKEIMQIALNQAKGARLHILS 536
            VL+DI G ED LGDMDFKVAGT  G+TALQMD+KI G+  EI+  A+NQAK ARLHIL+
Sbjct: 485 RVLTDIQGIEDFLGDMDFKVAGTDQGITALQMDMKIHGLPLEIIADAINQAKPARLHILN 544

Query: 537 VMDQAISAARSDISEFAPRIHTMKISVEKIKDVIGKGGAVIRQLTEETGTTIEIEDDGTI 596
            M +AI+  R+D+S +APR+  ++I+ E+I  VIG GG  IR +TE+TG  I+IED G +
Sbjct: 545 KMLEAIATPRADLSTYAPRLFRIQINPEQIGLVIGPGGKTIRSITEQTGAKIDIEDTGAV 604

Query: 597 KIAATDGDQAKEAIRRIQEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIA 656
            I+A D D A  A   I+ +T  +  G +Y GKV R+   GAFV  LPGK+G++HISQIA
Sbjct: 605 TISAVDADSALRAKSIIEGMTRTITAGDVYIGKVTRIIPIGAFVEFLPGKEGMIHISQIA 664

Query: 657 DKRVEKVSDYLTEGQEVQVKVLEIDRQGRVRLSMKEAVETSDAAAAEVAPQA 708
           D RV +V D LT G EV VKV EID++GRV L+ K  ++  + +AA  A +A
Sbjct: 665 DYRVARVEDELTVGDEVVVKVREIDQKGRVNLTRK-GIDPEEVSAARAAVEA 715