Pairwise Alignments

Query, 709 a.a., polyribonucleotide nucleotidyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 568 a.a., 30S ribosomal protein S1 from Sinorhizobium meliloti 1021

 Score = 57.0 bits (136), Expect = 2e-12
 Identities = 31/79 (39%), Positives = 51/79 (64%), Gaps = 2/79 (2%)

Query: 615 EITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRVEKVSDYLTEGQEVQ 674
           EI   +E G +  G V  + D+GAFV  L G DGL+H++ +A +RV   S+ L  GQ+V+
Sbjct: 190 EIVQNLEEGQVVEGVVKNITDYGAFVD-LGGIDGLLHVTDMAWRRVNHPSEILNIGQQVK 248

Query: 675 VKVLEIDRQ-GRVRLSMKE 692
           V+++ I+++  R+ L MK+
Sbjct: 249 VQIIRINQETHRISLGMKQ 267



 Score = 56.2 bits (134), Expect = 4e-12
 Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 2/93 (2%)

Query: 616 ITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIA-DKRVEKVSDYLTEGQEVQ 674
           I A+  VG   +G V  + D+GAFV + PG +GL+HIS+++  K+       L+  QEV 
Sbjct: 276 IGAKYPVGKKISGTVTNITDYGAFVELEPGIEGLIHISEMSWTKKNVHPGKILSTSQEVD 335

Query: 675 VKVLEID-RQGRVRLSMKEAVETSDAAAAEVAP 706
           V VLE+D  + R+ L +K+ +E    A A   P
Sbjct: 336 VVVLEVDPTKRRISLGLKQTLENPWQAFAHSHP 368



 Score = 35.4 bits (80), Expect = 8e-06
 Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 2/72 (2%)

Query: 623 GVIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRV-EKVSDYLTEGQEVQVKVLEID 681
           G    G+V    +FG F+ +    DG+VH+S +   R  E+V +   +G  V+  VL++D
Sbjct: 370 GTEVEGEVKNKTEFGLFIGLDGDVDGMVHLSDLDWNRPGEQVIEEFNKGDVVRAVVLDVD 429

Query: 682 -RQGRVRLSMKE 692
             + R+ L +K+
Sbjct: 430 VDKERISLGIKQ 441



 Score = 30.0 bits (66), Expect = 3e-04
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)

Query: 592 DDGTIKIAATDGDQAKEAIRRIQEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVH 651
           ++   K    +G  AK  +  I++  A V+VG+   G+V  L +FGA       KDG + 
Sbjct: 16  EESFAKTDLAEGYVAKGIVTAIEKDVAIVDVGLKVEGRVP-LKEFGA-----KAKDGTLK 69

Query: 652 ISQIADKRVEKVSDYLTE 669
           +    +  VE++ + L E
Sbjct: 70  VGDEVEVYVERIENALGE 87