Pairwise Alignments

Query, 709 a.a., polyribonucleotide nucleotidyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 708 a.a., 3' exoribonuclease (NCBI) from Rhodospirillum rubrum S1H

 Score =  779 bits (2012), Expect = 0.0
 Identities = 409/703 (58%), Positives = 517/703 (73%), Gaps = 4/703 (0%)

Query: 8   KTFQYGNHTVTLETGVMARQATAAVMATMDDTAVFVSVVGKKEAVVGQDFFPLTVNYQER 67
           K  ++G   + LETG +ARQA  AVMA++ DT V  + VG K      DFFPLTVNYQE+
Sbjct: 9   KEIEWGGRKLVLETGRIARQADGAVMASLGDTTVLCTAVGAKTKSKF-DFFPLTVNYQEK 67

Query: 68  TYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPDGFTNEVQVIATVVSVNPDVQP 127
           T+AAGKIPGGFFKREGRPSE ETL++RLIDRPIRPLF  G+ NE Q++ TV+  + +  P
Sbjct: 68  TFAAGKIPGGFFKREGRPSEKETLVSRLIDRPIRPLFVHGYKNETQLVCTVLCHDLENNP 127

Query: 128 DIISMIGTSAALAISGLPFNGPIGAARVGHIDGQLVLNPSEKELKQSRLDLVVAGTDNAV 187
           DI++++G SAAL +SGLPF GPIGAARVG IDG  VLNP+  ++  S LDLVVAGT   V
Sbjct: 128 DIVAIVGASAALTLSGLPFLGPIGAARVGLIDGAFVLNPTRDQMADSVLDLVVAGTREGV 187

Query: 188 LMVESEAQILTEEEMLAAVVFGHDQQQAVIKAINEFAAEVATPAWEWVAPAENTE-LKAK 246
           LMVESEA  L+E++ML AV+FGH+  Q VI AI   A + A        PA   E + AK
Sbjct: 188 LMVESEAHELSEQQMLDAVMFGHEGYQPVIDAIIALAEQCAREPRAIEPPAPEAEAVAAK 247

Query: 247 VAALAETRLVEAYQITEKMARYDRIHEISAEVTAALLAENEALDTKEIHTIFHDLEKTVV 306
           V  + E  L +AY+  +KM R+D++  +   VTAA   ++ AL        F DLEK +V
Sbjct: 248 VREVGEAGLRDAYKEADKMVRHDKVDAVRDAVTAAFAGDDAALALAG--AAFKDLEKDIV 305

Query: 307 RRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQALVTATLGTQRDAQII 366
           R SI+    RIDGR+   VR +++  G+LPR HGSALFTRGETQALVT TLGT +D QII
Sbjct: 306 RGSILDTGLRIDGRDTKTVRPIEIYPGILPRAHGSALFTRGETQALVTTTLGTGQDEQII 365

Query: 367 DELTGEKKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGIAAVMPSPEEFPYTV 426
           D L GE +++F+LHYNFPPY VGE G +GSP RREIGHG+LA R I  +MP+ + FPYTV
Sbjct: 366 DALEGEYRENFMLHYNFPPYSVGEAGRMGSPGRREIGHGKLAWRAIHPMMPAKDAFPYTV 425

Query: 427 RVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEENDFVVLSDILGDE 486
           RVVSEITESNGSSSMA+VCG+SLALMDAGVP+K +VAGIAMGL+KE+  F VLSDILGDE
Sbjct: 426 RVVSEITESNGSSSMATVCGTSLALMDAGVPLKNAVAGIAMGLIKEDERFAVLSDILGDE 485

Query: 487 DHLGDMDFKVAGTATGVTALQMDIKIEGITKEIMQIALNQAKGARLHILSVMDQAISAAR 546
           DHLGDMDFKVAGTA G+T+LQMDIKI  ITKEIM +ALNQAK  R+HIL  M +A+  AR
Sbjct: 486 DHLGDMDFKVAGTANGITSLQMDIKITSITKEIMNVALNQAKDGRIHILGEMTKALGNAR 545

Query: 547 SDISEFAPRIHTMKISVEKIKDVIGKGGAVIRQLTEETGTTIEIEDDGTIKIAATDGDQA 606
           SD+S+FAPRI T+K+  +K+++VIG GG VIR++TE TGT I+IEDDGTIKIA+ D +  
Sbjct: 546 SDVSDFAPRITTIKVPPQKVREVIGSGGKVIREITEVTGTKIDIEDDGTIKIASADAEAT 605

Query: 607 KEAIRRIQEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRVEKVSDY 666
           + A+  I+ I AE E+GV+YTGKV ++ DFGAFV  L  +DGLVHIS+++  RV+KV D 
Sbjct: 606 QRAVDWIKGIVAEPEIGVVYTGKVVKIMDFGAFVNFLGTRDGLVHISELSQDRVKKVGDV 665

Query: 667 LTEGQEVQVKVLEIDRQGRVRLSMKEAVETSDAAAAEVAPQAE 709
           +  G +V+VK +  D +G+++LSMK+  + + A  +  AP  E
Sbjct: 666 VNVGDQVKVKCVGFDDRGKIKLSMKQVDQVTGADLSTQAPAEE 708