Pairwise Alignments

Query, 709 a.a., polyribonucleotide nucleotidyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 743 a.a., polyribonucleotide nucleotidyltransferase from Parabacteroides merdae CL09T00C40

 Score =  546 bits (1406), Expect = e-159
 Identities = 311/702 (44%), Positives = 438/702 (62%), Gaps = 21/702 (2%)

Query: 5   PVVKTFQYGN-HTVTLETGVMARQATAAVMATMDDTAVFVSVVGKKEAVVGQDFFPLTVN 63
           P+ KT +  +  T+T+ETG +A+QA  AV   M +T +  +V   K+A  G DF PL V 
Sbjct: 4   PINKTIELADGRTITIETGKLAKQADGAVTVRMGNTVLLATVCAAKDANPGVDFMPLQVE 63

Query: 64  YQERTYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPDGFTNEVQVIATVVSVNP 123
           Y+E+  A G+ PGGF KREG+ S+ E L +RL+DR +RPLFPD +  EV V   + S + 
Sbjct: 64  YKEKFSAFGRFPGGFTKREGKASDYEILTSRLVDRALRPLFPDNYHAEVYVNVILFSADG 123

Query: 124 DVQPDIISMIGTSAALAISGLPFNGPIGAARVGHIDGQLVLNPSEKELKQSRLDLVVAGT 183
           +  PD ++ +  SAALA+S +PFNGPI   RV  IDG+ V+NP+  EL+++ +D++V  T
Sbjct: 124 EDMPDALAGLAASAALAVSDIPFNGPISECRVARIDGKYVVNPTFSELEKADIDIMVGAT 183

Query: 184 DNAVLMVESEAQILTEEEMLAAVVFGHDQQQAVIKAINEFAAEVA-TPAWEWVAPAENTE 242
            + ++MVE E   + E EML A+   H+  +   +A  E +         E+     + E
Sbjct: 184 LDNIMMVEGEMDEVQESEMLEAIKVAHEAIKVQCQAQLELSEACGKLVKREYCHEVNDDE 243

Query: 243 LKAKVAALAETRLVEAYQI----TEKMARYDRIHEISAEVTAALLAENEALDTK--EIHT 296
           L+  V    E    +AY +    T+K  R +    +  E  A   +E E  D K   I  
Sbjct: 244 LRKDV---HEKCYAKAYAVATSGTDKHQRAEAFEAVVEEYKAQ-FSEEELTDEKVEMIGR 299

Query: 297 IFHDLEKTVVRRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQALVTAT 356
            +HD+EK  +RR+I+    R+DGR+   +R + + T  LP  HGSA+FTRGETQ+L T T
Sbjct: 300 YYHDVEKEAMRRAILDEGKRLDGRKTTEIRPIWIETDCLPGPHGSAIFTRGETQSLSTVT 359

Query: 357 LGTQRDAQIIDELTGEKKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGIAAVM 416
           LGT+ D ++ID++    K+ FLLHYNFPP+  GE        RREIGHG LA R +  ++
Sbjct: 360 LGTKADEKMIDDVLNHGKERFLLHYNFPPFSTGEAKASRGVGRREIGHGNLAHRALKRMI 419

Query: 417 PSPEEFPYTVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEE--N 474
           P+  ++PY VRV+S+I ESNGSSSMA+VC  +LAL DAGVP+K  V+GIAMGL+ E    
Sbjct: 420 PT--DYPYVVRVISDILESNGSSSMATVCAGTLALRDAGVPMKKPVSGIAMGLISENKGQ 477

Query: 475 DFVVLSDILGDEDHLGDMDFKVAGTATGVTALQMDIKIEGITKEIMQIALNQAKGARLHI 534
           ++ +LSDILGDEDHLGDMDFKV GT  G+TA QMDIK++G++ EI++ AL QAK  R+HI
Sbjct: 478 NYAILSDILGDEDHLGDMDFKVTGTKDGITATQMDIKVDGLSYEILENALAQAKEGRMHI 537

Query: 535 LSVMDQAISAARSDISEFAPRIHTMKISVEKIKDVIGKGGAVIRQLTEETGTTIEIEDD- 593
           L  + +A    R D+   APRI TM I  E I  VIG GG +I+ + E+TG  I IE++ 
Sbjct: 538 LGKIMEAQPEVRPDLKPHAPRIETMTIGKEFIGAVIGPGGKIIQGIQEKTGAVITIEEED 597

Query: 594 --GTIKIAATDGDQAKEAIRRIQEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVH 651
             G I+I+ T+      AIR I+ I A  E+G IY GK++ +  +GAFV  +PGKDGL+H
Sbjct: 598 GVGKIEISGTNKATIDAAIRSIKAIVAVPEIGEIYEGKISSIMPYGAFVEFMPGKDGLLH 657

Query: 652 ISQIADKRVEKVSDY-LTEGQEVQVKVLEID-RQGRVRLSMK 691
           IS+I  KR+E V    L EG  + VK+++ID + G+ +LS K
Sbjct: 658 ISEIDWKRLETVEQAGLKEGDTISVKLVDIDAKTGKFKLSHK 699