Pairwise Alignments

Query, 709 a.a., polyribonucleotide nucleotidyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 700 a.a., polynucleotide phosphorylase/polyadenylase (RefSeq) from Shewanella loihica PV-4

 Score = 1017 bits (2629), Expect = 0.0
 Identities = 519/697 (74%), Positives = 589/697 (84%)

Query: 5   PVVKTFQYGNHTVTLETGVMARQATAAVMATMDDTAVFVSVVGKKEAVVGQDFFPLTVNY 64
           P+VK+F+YG HTVTLETGV+ARQA AAV+A+M DT V V+VVGKK    G+DFFPLTVNY
Sbjct: 3   PIVKSFEYGQHTVTLETGVIARQADAAVLASMGDTTVLVTVVGKKAEEPGRDFFPLTVNY 62

Query: 65  QERTYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPDGFTNEVQVIATVVSVNPD 124
           QE+TYAAGKIPGGFFKREGRPSEGETL ARLIDRPIRPLFP+GF NEVQVI TVVSV+P+
Sbjct: 63  QEKTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPNGFKNEVQVIITVVSVDPE 122

Query: 125 VQPDIISMIGTSAALAISGLPFNGPIGAARVGHIDGQLVLNPSEKELKQSRLDLVVAGTD 184
           + P++ISMIGTSAAL+ISG+PFNGP+G+ARVG++DG+ +LNP+  +L+ S+L+L VAGT+
Sbjct: 123 ISPEVISMIGTSAALSISGIPFNGPLGSARVGYVDGEYILNPTVSQLENSQLELSVAGTE 182

Query: 185 NAVLMVESEAQILTEEEMLAAVVFGHDQQQAVIKAINEFAAEVATPAWEWVAPAENTELK 244
           NAVLMVESEA  L EE ML AVV+GH+QQQ VI+AI E  AEV  P W+W AP +N EL 
Sbjct: 183 NAVLMVESEADALPEEVMLGAVVYGHEQQQVVIQAIKELKAEVNKPMWDWTAPVQNEELV 242

Query: 245 AKVAALAETRLVEAYQITEKMARYDRIHEISAEVTAALLAENEALDTKEIHTIFHDLEKT 304
           AKV  LAE  L EAYQI  K  RY ++  +      ALLAEN   D +EI  +   LEK 
Sbjct: 243 AKVKDLAEAGLTEAYQIVVKQDRYAQVDVVKTAAKEALLAENPDADAREIDGLLGSLEKK 302

Query: 305 VVRRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQALVTATLGTQRDAQ 364
           VVR  IIAGNPRIDGRE DMVRAL V  GVLPRTHGSALFTRGETQALVT TLGT+RDAQ
Sbjct: 303 VVRSRIIAGNPRIDGREPDMVRALSVMAGVLPRTHGSALFTRGETQALVTCTLGTERDAQ 362

Query: 365 IIDELTGEKKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGIAAVMPSPEEFPY 424
            ID + GE+   F+LHYNFPPY VGETG VGSPKRREIGHG+LA RGI AVMP+ EEFPY
Sbjct: 363 KIDSIMGEQTSRFMLHYNFPPYSVGETGMVGSPKRREIGHGKLAWRGIHAVMPTAEEFPY 422

Query: 425 TVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEENDFVVLSDILG 484
           ++RVVSEITESNGSSSMASVCG+SLALMDAGVPIK SVAGIAMGLVKE +DFVVLSDILG
Sbjct: 423 SIRVVSEITESNGSSSMASVCGTSLALMDAGVPIKTSVAGIAMGLVKEGDDFVVLSDILG 482

Query: 485 DEDHLGDMDFKVAGTATGVTALQMDIKIEGITKEIMQIALNQAKGARLHILSVMDQAISA 544
           DEDHLGDMDFKVAGT  GVTALQMDIKIEGITKEIMQIAL QA GAR+HIL+VMDQAIS 
Sbjct: 483 DEDHLGDMDFKVAGTRDGVTALQMDIKIEGITKEIMQIALQQAYGARVHILNVMDQAISG 542

Query: 545 ARSDISEFAPRIHTMKISVEKIKDVIGKGGAVIRQLTEETGTTIEIEDDGTIKIAATDGD 604
            R++IS+ APRI T+KI+ EKI+DVIGKGGA IR LTEETGTTIE+EDDGT+KIA+ +GD
Sbjct: 543 HRAEISDHAPRITTLKINPEKIRDVIGKGGATIRALTEETGTTIELEDDGTVKIASANGD 602

Query: 605 QAKEAIRRIQEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRVEKVS 664
             KEAIRRIQEITAEVEVG +Y GKV R+ DFGAFVTILPGKDGLVHISQIA++RV  VS
Sbjct: 603 ATKEAIRRIQEITAEVEVGTVYNGKVVRIVDFGAFVTILPGKDGLVHISQIAEERVANVS 662

Query: 665 DYLTEGQEVQVKVLEIDRQGRVRLSMKEAVETSDAAA 701
           DYL  GQEV+VKV+E+DRQGRVRLSMKEA    +AA+
Sbjct: 663 DYLEVGQEVKVKVMEVDRQGRVRLSMKEAQPKEEAAS 699