Pairwise Alignments

Query, 709 a.a., polyribonucleotide nucleotidyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., polynucleotide phosphorylase/polyadenylase from Herbaspirillum seropedicae SmR1

 Score =  896 bits (2316), Expect = 0.0
 Identities = 460/707 (65%), Positives = 560/707 (79%), Gaps = 7/707 (0%)

Query: 6   VVKTFQYGNHTVTLETGVMARQATAAVMATMDDTAVFVSVVGKKEAVVGQDFFPLTVNYQ 65
           V KTFQYG H VTLETG +ARQA+ AV+ +++DT +  +VV +KEA  GQDFFPLTV+Y 
Sbjct: 5   VTKTFQYGQHQVTLETGEIARQASGAVVVSVEDTVILATVVARKEAKPGQDFFPLTVDYI 64

Query: 66  ERTYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPDGFTNEVQVIATVVSVNPDV 125
           E+TYAAG+IPGGFFKREG+PSE ETL +RLIDRPIRPLFP+G+ NEVQVI  V+SVNP++
Sbjct: 65  EKTYAAGRIPGGFFKREGKPSEKETLTSRLIDRPIRPLFPEGYLNEVQVIIHVLSVNPEI 124

Query: 126 QPDIISMIGTSAALAISGLPFNGPIGAARVGHIDGQLVLNPSEKELKQSRLDLVVAGTDN 185
            PDI +MIG SAAL+++G+PFNGP+GAARVG+IDGQ VLNP+  +LK S+LDLVVAGT+ 
Sbjct: 125 DPDIPAMIGASAALSLAGIPFNGPVGAARVGYIDGQYVLNPTTSQLKSSQLDLVVAGTET 184

Query: 186 AVLMVESEAQILTEEEMLAAVVFGHDQQQAVIKAINEFAAEVATPAWEWVAPAENTELKA 245
           AVLMVESEA  L+EE ML AVVFGHDQ +AVI+AI+    +   P  +W APA+N  L A
Sbjct: 185 AVLMVESEADQLSEEVMLGAVVFGHDQSKAVIEAIHALVRDGGKPEVQWTAPAKNEALIA 244

Query: 246 KVAALAETRLVEAYQITEKMARYDRIHEISAEVTAALLAE-----NEALDTKEIHTIFHD 300
           +V+ LAE  L EAYQ  +K AR +++  ++A+V  AL+AE       A D  E+ +I  D
Sbjct: 245 RVSQLAEGPLREAYQTKDKQARTEKLKAVTAQVNEALVAEAAANNGVAADAAEVGSILFD 304

Query: 301 LEKTVVRRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQALVTATLGTQ 360
           LE  +VR  I+ G PRIDGR+   VR + +RTGVLPRTHGSALFTRGETQALV ATLGT 
Sbjct: 305 LEAKIVRSQILEGEPRIDGRDTRTVRPISIRTGVLPRTHGSALFTRGETQALVIATLGTA 364

Query: 361 RDAQIIDELTGEKKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGIAAVMPSPE 420
           RD Q ID L GE  D F+LHYN PP+  GETG VG+PKRREIGHGRLAKR + A +P+ +
Sbjct: 365 RDEQKIDGLLGEYSDRFMLHYNMPPFATGETGRVGTPKRREIGHGRLAKRALIAALPAAD 424

Query: 421 EFPYTVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEENDFVVLS 480
           EF Y+VR+VSEITESNGSSSMASVCG  LALMDAGVP+KA VAGIAMGL+KE N F VL+
Sbjct: 425 EFSYSVRLVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLIKEGNKFAVLT 484

Query: 481 DILGDEDHLGDMDFKVAGTATGVTALQMDIKIEGITKEIMQIALNQAKGARLHILSVMDQ 540
           DILGDEDHLGDMDFKVAGTA G+TALQMDIKI+GITKEIMQ+AL QAK  R HIL  M +
Sbjct: 485 DILGDEDHLGDMDFKVAGTANGITALQMDIKIQGITKEIMQVALEQAKEGRHHILGKMQE 544

Query: 541 AISAARSDISEFAPRIHTMKISVEKIKDVIGKGGAVIRQLTEETGTTIEIEDDGTIKIAA 600
           A+ A R+++S+FAPR+ T+KI+ EKI+DVIGKGGAVIR LTEETGT I+I D+G + IA+
Sbjct: 545 AVPAGRAELSDFAPRLITIKINPEKIRDVIGKGGAVIRALTEETGTQIDISDEGVVTIAS 604

Query: 601 TDGDQAKEAIRRIQEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRV 660
            D    +EA RRI+E+TA VEVG IY G V +L DFGA V +LPGKDGL+HISQIA++RV
Sbjct: 605 VDASAGQEAKRRIEELTASVEVGKIYEGTVLKLLDFGAIVQVLPGKDGLLHISQIANERV 664

Query: 661 EKVSDYLTEGQEVQVKVLEIDRQGRVRLSMK--EAVETSDAAAAEVA 705
             V+DYL EGQ+V+VKVLE D +GR++LSMK  +A E  +AAA + A
Sbjct: 665 NAVADYLKEGQQVRVKVLETDDRGRLKLSMKAAQAEEGGEAAAPQEA 711