Pairwise Alignments

Query, 709 a.a., polyribonucleotide nucleotidyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 760 a.a., polyribonucleotide nucleotidyltransferase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  597 bits (1538), Expect = e-175
 Identities = 323/689 (46%), Positives = 453/689 (65%), Gaps = 10/689 (1%)

Query: 9   TFQYGNHTVTLETGVMARQATAAVMATMDDTAVFVSVVGKK-EAVVGQDFFPLTVNYQER 67
           T   G   +  ETG +A QA  AV      T V V+   +  +  +G  FFPLTV Y E+
Sbjct: 11  TATVGGKEIVFETGRLANQADGAVWIQCGGTVVLVTACSQATDRDLG--FFPLTVEYSEK 68

Query: 68  TYAAGKIPGGFFKRE-GRPSEGETLIARLIDRPIRPLFPDGFTNEVQVIATVVSVNPDVQ 126
            YAAG+IPG FF+RE GRPSE ETL++RLIDRPIRPLFP G  +EVQV+A V+S + +  
Sbjct: 69  MYAAGRIPGSFFRREIGRPSERETLVSRLIDRPIRPLFPKGLKDEVQVLANVISSDQNND 128

Query: 127 PDIISMIGTSAALAISGLPFNGPIGAARVGHIDGQLVLNPSEKELKQSRLDLVVAGTDNA 186
            D++++ G S AL +S +PF+GP+  AR+G IDGQ V+NP+ KE+++S L++V+A + +A
Sbjct: 129 SDVLAVTGASTALGLSSIPFDGPVAGARIGRIDGQFVINPTIKEMERSDLNIVLAASRDA 188

Query: 187 VLMVESEAQILTEEEMLAAVVFGHDQQQAVIKAINEFAAEVATPAWEWVAPAENTELKAK 246
           V+MVE EA  + E  ++ A+ +GH + Q +I A  +          E+ AP E+ +L A+
Sbjct: 189 VVMVEGEASFVPEAVIVEALEWGHKEIQPLIDAQLKLREMAGKAKREFTAPVEDADLAAR 248

Query: 247 VAALAETRLVEAYQITEKMARYDRIHEISAEVTAALLAE----NEALDTKEIHTIFHDLE 302
           VAALA   L  A +I EKMAR D    +  +V  AL+A+     +    + +  I   LE
Sbjct: 249 VAALATADLDVALRIPEKMARKDARKAVKEKVMEALVADPAYAEDTTPLRAVGDILSALE 308

Query: 303 KTVVRRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQALVTATLGTQRD 362
           K +VR  I+    RIDGR+   VR + +  G+LPR HGSALF RGET++LV ATLG+  D
Sbjct: 309 KRIVRERIVREGRRIDGRDTTTVRPILIEAGILPRAHGSALFARGETKSLVVATLGSSTD 368

Query: 363 AQIIDELTGEKKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGIAAVMPSPEEF 422
            Q +D LTG+    F+LHYNF PYCVGE   V    RREIGHG LA++ +  ++P  E+F
Sbjct: 369 EQRMDSLTGDVTKRFMLHYNFAPYCVGEVKPV-RVSRREIGHGALAEKALRPILPLGEDF 427

Query: 423 PYTVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEENDFVVLSDI 482
           P+T+RVV+E  ESNGSSSMA+VCG  L+LMDAGVPI A VAG+AMGL+KE + +VVL+DI
Sbjct: 428 PFTLRVVAETMESNGSSSMAAVCGGCLSLMDAGVPITAPVAGVAMGLIKEGDQYVVLTDI 487

Query: 483 LGDEDHLGDMDFKVAGTATGVTALQMDIKIEGITKEIMQIALNQAKGARLHILSVMDQAI 542
           LGDED LGDMDFK+AGT+ G+TA+QMDIK++G+  ++M  A+ QA+ ARLHIL  M + +
Sbjct: 488 LGDEDALGDMDFKIAGTSEGITAVQMDIKVKGLPTDVMARAMQQARDARLHILGEMGKVL 547

Query: 543 SAARSDISEFAPRIHTMKISVEKIKDVIGKGGAVIRQLTEETGTTIEIEDDGTIKIAATD 602
            A R+++S +AP+   + ++ + I+ +IG GG  I+ +T  TG +I+IED G + I A  
Sbjct: 548 EAPRAELSAYAPQHAEVFVNPDIIRIIIGPGGKNIKAITATTGASIDIEDSGRVSIFAPT 607

Query: 603 GDQAKEAIRRIQEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRVEK 662
            +  + A   +Q      ++G  YTGKV ++ + GA V ILP  + LVHISQ+   RVE+
Sbjct: 608 LEAMEMAREMVQYYDQRADIGKNYTGKVRKVLEIGAIVEILPNLEALVHISQLDTNRVEQ 667

Query: 663 VSDYLTEGQEVQVKVLEIDRQGRVRLSMK 691
            SD    G+++ VKV+EI+   R+R S K
Sbjct: 668 ASDVARLGEDMVVKVIEINGD-RIRASRK 695