Pairwise Alignments

Query, 709 a.a., polyribonucleotide nucleotidyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., ribosomal protein S1 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 66.2 bits (160), Expect = 4e-15
 Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 1/78 (1%)

Query: 616 ITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRVEKVSDYLTEGQEVQV 675
           + A   VG + TG V  + DFG FV +  G +GLVH+S+I+ K+++  S+   EGQE+Q 
Sbjct: 460 VPATYPVGTLVTGSVTNITDFGLFVEVEEGIEGLVHVSEISQKKIKSPSEIYKEGQEIQA 519

Query: 676 KVLEID-RQGRVRLSMKE 692
           KV+ +   + R+ LS+K+
Sbjct: 520 KVIHVSAEERRLGLSIKQ 537



 Score = 60.8 bits (146), Expect = 2e-13
 Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 2/96 (2%)

Query: 614 QEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIA-DKRVEKVSDYLTEGQE 672
           Q+ITA+   G+   GKV  L D+GAFV + PG +GLVHIS+++  +++   S  +  G E
Sbjct: 284 QDITAKFPEGLRGQGKVTNLVDYGAFVELEPGVEGLVHISEMSWTRKLRHPSQMVRVGDE 343

Query: 673 VQVKVLEID-RQGRVRLSMKEAVETSDAAAAEVAPQ 707
           V+V +L +D  + R+ L MK+         AE  P+
Sbjct: 344 VEVVILGVDPDKKRISLGMKQVKPNPWEVVAEKYPE 379



 Score = 56.6 bits (135), Expect = 3e-12
 Identities = 30/82 (36%), Positives = 50/82 (60%), Gaps = 2/82 (2%)

Query: 614 QEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRVEKVSDYLTEGQEV 673
           Q++   +E G +  GK   + ++G FV  L G DGL+HI+ ++ KR+    + ++ GQE+
Sbjct: 199 QDLLRTLEEGQVVKGKAKNITEYGVFVD-LGGLDGLLHITDMSWKRIRHPKELVSLGQEL 257

Query: 674 QVKVLEIDRQG-RVRLSMKEAV 694
           ++KVL  DR   +V L MK+ V
Sbjct: 258 ELKVLSFDRDSQKVSLGMKQLV 279



 Score = 50.1 bits (118), Expect = 3e-10
 Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 9/117 (7%)

Query: 588 IEIEDDGTIKIAATDGDQAKEAIRRIQ------EITAE-VEVGVIYTGKVARLADFGAFV 640
           + + D+  + I   D D+ + ++   Q      E+ AE    G I  G +  + +FG F+
Sbjct: 338 VRVGDEVEVVILGVDPDKKRISLGMKQVKPNPWEVVAEKYPEGTILEGVIKNITEFGMFI 397

Query: 641 TILPGKDGLVHISQIA-DKRVEKVSDYLTEGQEVQVKVLEIDRQG-RVRLSMKEAVE 695
            I  G DGL+H+S I+  K++   ++    G  VQ KVL +D++  +  L +K+  E
Sbjct: 398 GIEDGIDGLIHVSDISWTKKIRHPNEMYKVGDVVQAKVLTVDQENEKFTLGVKQLAE 454