Pairwise Alignments

Query, 709 a.a., polyribonucleotide nucleotidyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., 30S ribosomal protein S1 (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 57.8 bits (138), Expect = 2e-12
 Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 2/78 (2%)

Query: 614 QEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIA-DKRVEKVSDYLTEGQE 672
           + I  +  VG  +T KV    +FG FV I  G DGL+HIS ++  K+V+  S++   G +
Sbjct: 377 ETIEEKYPVGSKHTAKVRNFTNFGVFVEIEEGVDGLIHISDLSWTKKVKHPSEFTQIGAD 436

Query: 673 VQVKVLEIDRQGRVRLSM 690
           ++V+VLEID++ R RLS+
Sbjct: 437 IEVQVLEIDKENR-RLSL 453



 Score = 56.2 bits (134), Expect = 4e-12
 Identities = 32/106 (30%), Positives = 59/106 (55%), Gaps = 10/106 (9%)

Query: 590 IEDDGTIKIAATDGDQAKEAIRR-IQEIT--------AEVEVGVIYTGKVARLADFGAFV 640
           +E D  + +   D D  K+ I   ++++T         +++VG    GKV  +AD+GAF+
Sbjct: 257 VELDQKLNVVILDFDDEKKRIALGLKQLTPHPWDALDTDLKVGDKVKGKVVVMADYGAFI 316

Query: 641 TILPGKDGLVHISQIA-DKRVEKVSDYLTEGQEVQVKVLEIDRQGR 685
            I  G +GL+H+S+++  + +    D++  G EV+  VL +DR+ R
Sbjct: 317 EIATGVEGLIHVSEMSWSQHLRSAQDFMKVGDEVEAVVLTLDREER 362



 Score = 44.3 bits (103), Expect = 2e-08
 Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 2/80 (2%)

Query: 614 QEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQIADKRVEKVSDYLTEGQEV 673
           +EI  ++E G +  G V  +  +G F+  L G DGL+HI+ ++  RV    + +   Q++
Sbjct: 205 KEIIGKLEKGQVLEGTVKNITSYGVFID-LGGVDGLIHITDLSWGRVSDPKEVVELDQKL 263

Query: 674 QVKVLEI-DRQGRVRLSMKE 692
            V +L+  D + R+ L +K+
Sbjct: 264 NVVILDFDDEKKRIALGLKQ 283