Pairwise Alignments

Query, 709 a.a., polyribonucleotide nucleotidyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 708 a.a., polyribonucleotide nucleotidyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  572 bits (1474), Expect = e-167
 Identities = 325/698 (46%), Positives = 440/698 (63%), Gaps = 13/698 (1%)

Query: 5   PVVKTFQYGN-HTVTLETGVMARQATAAVMATMDDTAVFVSVVGKKEAVVGQDFFPLTVN 63
           P+VKT +  +  T+TLETG +A+QA  +VM  M +T +  +V   K+AV G DF PL V 
Sbjct: 4   PIVKTIELPDGRTITLETGKLAKQADGSVMLRMGNTMLLATVCAAKDAVPGTDFMPLQVE 63

Query: 64  YQERTYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPDGFTNEVQVIATVVSVNP 123
           Y+E+  A G+ PGGF KREGR S+ E L  RL+DR +RPLFPD +  EV V   + S + 
Sbjct: 64  YKEKFAAFGRFPGGFTKREGRASDYEILTCRLVDRALRPLFPDNYHAEVYVNIILFSADG 123

Query: 124 DVQPDIISMIGTSAALAISGLPFNGPIGAARVGHIDGQLVLNPSEKELKQSRLDLVVAGT 183
              PD ++ +  SAALA+S +PFNGPI   RV  IDGQ V+NP+  +L+++ +DL+VA T
Sbjct: 124 VDMPDALAGLAASAALAVSDIPFNGPISEVRVARIDGQFVINPTFDQLEKADMDLMVAAT 183

Query: 184 DNAVLMVESEAQILTEEEMLAAVVFGHDQQQAVIKAINEFAAEVA-TPAWEWVAPAENTE 242
            + ++MVE E   ++E E+L A+   H+  +   KA  E   EV  T   E+     + E
Sbjct: 184 YDNIMMVEGEMHEVSEAELLEAMKVAHEAIKVHCKAQMELTEEVGKTVKREYNHEVNDEE 243

Query: 243 LKAKV--AALAETRLVEAYQITEKMARYDRIHEISAEVTAALLAENEALDTKEIHTIFHD 300
           L+  V  A   +   V A     K  R+D    I  E  A    E        I   +HD
Sbjct: 244 LRKAVREACYDKAYAVAASGNNNKHERFDAFDAIREEFKAQFSEEELEEKAPLIDRYYHD 303

Query: 301 LEKTVVRRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQALVTATLGTQ 360
           +EK  +RRSI+    R+DGR+   +R +    G LP  HGSA+FTRGETQ+L + TLGT+
Sbjct: 304 VEKEAMRRSILDEGKRLDGRKTTEIRPIWCEVGPLPGPHGSAIFTRGETQSLTSVTLGTK 363

Query: 361 RDAQIIDELTGEKKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGIAAVMPSPE 420
            D +IID +    K+ FLLHYNFPP+  GE        RREIGHG LA R +   +P+  
Sbjct: 364 LDEKIIDNVLEHGKERFLLHYNFPPFSTGEAKAQRGVGRREIGHGHLAWRALKGQIPA-- 421

Query: 421 EFPYTVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKE--ENDFVV 478
           ++PY VRVVSEI ESNGSSSMA+VC  +LALMDAGV IK  V+GIAMGL+K   E  + V
Sbjct: 422 DYPYVVRVVSEILESNGSSSMATVCAGTLALMDAGVKIKKPVSGIAMGLIKNPGEEKYAV 481

Query: 479 LSDILGDEDHLGDMDFKVAGTATGVTALQMDIKIEGITKEIMQIALNQAKGARLHILSVM 538
           LSDILGDEDHLGDMDFKV GT  G+TA QMDIK++G++ EI++ ALNQAK  R+HIL  +
Sbjct: 482 LSDILGDEDHLGDMDFKVTGTRDGITATQMDIKVDGLSYEILERALNQAKEGRMHILDKI 541

Query: 539 DQAISAARSDISEFAPRIHTMKISVEKIKDVIGKGGAVIRQLTEETGTTIEIEDD---GT 595
            + I+  R+D+ + APRI TM I  E I  VIG GG +I+ + EETG  I IE+    G 
Sbjct: 542 TETIAEPRADLKDHAPRIETMTIPKEFIGAVIGPGGKIIQGMQEETGAVITIEETDGMGR 601

Query: 596 IKIAATDGDQAKEAIRRIQEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQI 655
           I+++ T+     +A+R I+ I A  EVG +Y GKV  +  +GAF+  LPGKDGL+HIS+I
Sbjct: 602 IEVSGTNKKCIDDAMRMIKAIVAVPEVGEVYKGKVRSIMPYGAFIEFLPGKDGLLHISEI 661

Query: 656 ADKRVEKVSDY-LTEGQEVQVKVLEID-RQGRVRLSMK 691
             KR+E V +  + EG E++VK+++ID + G+ +LS K
Sbjct: 662 DWKRLETVEEAGIKEGDEIEVKLIDIDPKTGKFKLSRK 699