Pairwise Alignments

Query, 709 a.a., polyribonucleotide nucleotidyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 716 a.a., polynucleotide phosphorylase/polyadenylase from Burkholderia phytofirmans PsJN

 Score =  862 bits (2227), Expect = 0.0
 Identities = 442/714 (61%), Positives = 549/714 (76%), Gaps = 7/714 (0%)

Query: 1   MFEKPVVKTFQYGNHTVTLETGVMARQATAAVMATMDDTAVFVSVVGKKEAVVGQDFFPL 60
           MF K +VK FQ+G H V LETG +ARQA+ AV+  ++DT V  +VVG K A  GQDFFPL
Sbjct: 1   MFNK-IVKEFQWGQHKVRLETGEIARQASGAVIVDVEDTVVLATVVGAKTAKPGQDFFPL 59

Query: 61  TVNYQERTYAAGKIPGGFFKREGRPSEGETLIARLIDRPIRPLFPDGFTNEVQVIATVVS 120
           TV+Y E+TYAAGKIPGGFF+REGRPSEGETLI+RLIDRP+RPLFP+GF NEVQV+  V+S
Sbjct: 60  TVDYLEKTYAAGKIPGGFFRREGRPSEGETLISRLIDRPLRPLFPEGFYNEVQVVIHVLS 119

Query: 121 VNPDVQPDIISMIGTSAALAISGLPFNGPIGAARVGHIDGQLVLNPSEKELKQSRLDLVV 180
           +NP++  DI ++IG SAALA+SGLPFNGP+GAARV +I+ + VLNP+  ++K+S LDL+V
Sbjct: 120 LNPEIPADIPALIGASAALAVSGLPFNGPVGAARVAYINNEYVLNPTRPQMKESALDLIV 179

Query: 181 AGTDNAVLMVESEAQILTEEEMLAAVVFGHDQQQAVIKAINEFAAEVATPAWEWVAPAEN 240
           AGT+ AVLMVESEAQ L+EE ML  VVFGH+Q Q  I AI++   E   P W+W   A+N
Sbjct: 180 AGTERAVLMVESEAQQLSEEVMLGGVVFGHEQMQIAIDAIHDLVREGGKPEWDWQPAAKN 239

Query: 241 TELKAKVAALAETRLVEAYQITEKMARYDRIHEISAEVTAALLAE-----NEALDTKEIH 295
             L A+V  LA+  L+ AYQ+ +K AR  ++ E+ A  +  L  +       A D   + 
Sbjct: 240 EPLIARVTELAQADLLAAYQLRDKQARSAKLKEVYAATSKKLEEDAAAGGTVAADKATVG 299

Query: 296 TIFHDLEKTVVRRSIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSALFTRGETQALVTA 355
            +  D+E  +VR  I+ G PRIDGR+   VR +++RTGVLPRTHGSALFTRGETQA+V A
Sbjct: 300 NVLFDIEAKIVRTQILNGEPRIDGRDTRTVRPIEIRTGVLPRTHGSALFTRGETQAMVVA 359

Query: 356 TLGTQRDAQIIDELTGEKKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGRLAKRGIAAV 415
           TLGT+ D Q ID L GE ++ F+LHYN PP+  GETG VGSPKRREIGHGRLAKR +AA 
Sbjct: 360 TLGTKGDEQNIDALEGEYRERFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALAAC 419

Query: 416 MPSPEEFPYTVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEEND 475
           +PS +EF Y++RVVSEITESNGSSSMASVCG  LALMDAGVP+KA VAGIAMGL+ E N 
Sbjct: 420 LPSADEFGYSIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILEGNK 479

Query: 476 FVVLSDILGDEDHLGDMDFKVAGTATGVTALQMDIKIEGITKEIMQIALNQAKGARLHIL 535
           F VL+DILGDEDHLGDMDFKVAGT  GVTALQMDIKI+GITKEIMQ+AL QAK  R+HIL
Sbjct: 480 FAVLTDILGDEDHLGDMDFKVAGTEQGVTALQMDIKIQGITKEIMQVALAQAKEGRMHIL 539

Query: 536 SVMDQAISAARSDISEFAPRIHTMKISVEKIKDVIGKGGAVIRQLTEETGTTIEIEDDGT 595
           S M  A+S A + +S++APR+ T+KI+ EKI+DVIGKGG+VIR LTEETGTTI+I DDG 
Sbjct: 540 SKMTSAVSGANTVLSDYAPRMITIKINPEKIRDVIGKGGSVIRALTEETGTTIDISDDGV 599

Query: 596 IKIAATDGDQAKEAIRRIQEITAEVEVGVIYTGKVARLADFGAFVTILPGKDGLVHISQI 655
           + IA+T  +   EA +RI+ IT EVEVG +Y G V +L DFGA V ILPGKDGL+HIS+I
Sbjct: 600 VTIASTSSEGMAEAKKRIENITLEVEVGQVYEGTVLKLLDFGAIVNILPGKDGLLHISEI 659

Query: 656 ADKRVEKVSDYLTEGQEVQVKVLEIDRQGRVRLSMKEAVETSDAAAAEVAPQAE 709
           A++R++ ++DYL +GQ+V+VKV++ D +GRVRLS K A+    A  A  APQ E
Sbjct: 660 ANERIKDINDYLKDGQQVKVKVIQTDEKGRVRLSAK-ALLNEGANGASGAPQGE 712