Pairwise Alignments

Query, 312 a.a., tRNA pseudouridine(55) synthase TruB from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., tRNA pseudouridine synthase B from Marinobacter adhaerens HP15

 Score =  287 bits (735), Expect = 2e-82
 Identities = 152/315 (48%), Positives = 211/315 (66%), Gaps = 15/315 (4%)

Query: 1   MARRRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGE 60
           M+RRRKGR ++G++++DKP G++SN  LQ+VKRL+GA KAGHTGALDPLATG+LP+C GE
Sbjct: 1   MSRRRKGRDVNGILVIDKPAGVTSNGILQQVKRLFGAAKAGHTGALDPLATGVLPLCFGE 60

Query: 61  ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPV--HVDYDTLLACIAKFRGET 118
           ATKFSQ +LDSDK Y   A+LG RT+T DS+G VV  +PV   +  + L   +  FRG+ 
Sbjct: 61  ATKFSQMMLDSDKAYIATARLGVRTETGDSEGAVVAEKPVPAGLTAEVLEPLLDGFRGDI 120

Query: 119 DQVPSMFSALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTY 178
            QVPSM+SALK++GRPLYEYAR+GIEV R AR +T+YE+ L     +E+++ V C+KGTY
Sbjct: 121 QQVPSMYSALKHKGRPLYEYAREGIEVERPARPVTIYELTLLDIRENELDIAVSCTKGTY 180

Query: 179 IRTIVDDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDP 238
           IR++V+D+GE LGCGAHVT LRR   + +       +  L A+ E+         + LD 
Sbjct: 181 IRSLVEDIGEALGCGAHVTALRRTMASGFTLADAHAVSDLEAMRER--------GESLDG 232

Query: 239 LLLPMDTAVEALPEVNVIPELMTLIQHGQAVQVSGAPSDGMVRITGGE--QKLFLGVGEI 296
           LL+  D A+   PE  +  + +  I +GQ V++ G   DG VR+   E   + F+G+ E 
Sbjct: 233 LLVAPDAALSMFPEHRLAGQALVSILNGQPVRIPGQAYDGFVRLYANESANESFVGLAEA 292

Query: 297 DDNGK---VAPKRLV 308
              G+   + P+RLV
Sbjct: 293 FPEGEQTNLVPRRLV 307