Pairwise Alignments

Query, 312 a.a., tRNA pseudouridine(55) synthase TruB from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., tRNA pseudouridine(55) synthase from Klebsiella michiganensis M5al

 Score =  424 bits (1090), Expect = e-123
 Identities = 208/306 (67%), Positives = 247/306 (80%)

Query: 4   RRKGRVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGEATK 63
           RR+GR +HGV+LLDKP G SSND LQKVKRLY A +AGHTGALDPLATGMLPICLGEATK
Sbjct: 5   RRRGRDVHGVLLLDKPQGASSNDVLQKVKRLYNANRAGHTGALDPLATGMLPICLGEATK 64

Query: 64  FSQFLLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVHVDYDTLLACIAKFRGETDQVPS 123
           FSQ+LLDSDKRYRVIAKLG+RTDTSD+DGQVV+ RP+    + L A +  FRGET Q+PS
Sbjct: 65  FSQYLLDSDKRYRVIAKLGQRTDTSDADGQVVEERPLAFSPEQLAAALDGFRGETQQIPS 124

Query: 124 MFSALKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIRTIV 183
           M+SALKYQG+ LYEYARQGIEVPRE+R ITVYE+   R EG E+E+E+HCSKGTYIRTI+
Sbjct: 125 MYSALKYQGKKLYEYARQGIEVPRESRPITVYELLFIRHEGSELELEIHCSKGTYIRTII 184

Query: 184 DDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLLLPM 243
           DDLGE LGCGAHVT LRR+ V+ YP ERMVTLEQL ALVEQA+  +   A +LDPLL+PM
Sbjct: 185 DDLGEKLGCGAHVTFLRRLAVSKYPVERMVTLEQLQALVEQANAQDIPAAQLLDPLLMPM 244

Query: 244 DTAVEALPEVNVIPELMTLIQHGQAVQVSGAPSDGMVRITGGEQKLFLGVGEIDDNGKVA 303
           D+     P +N+        ++G  V+ SGAP  G+VR+T G ++ FLG+GEIDD G+VA
Sbjct: 245 DSPASDYPLINIPETSAVYFKNGNPVRTSGAPLQGLVRVTEGAEEKFLGMGEIDDEGRVA 304

Query: 304 PKRLVV 309
           P+RLVV
Sbjct: 305 PRRLVV 310