Pairwise Alignments

Query, 312 a.a., tRNA pseudouridine(55) synthase TruB from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., tRNA pseudouridine(55) synthase TruB from Ralstonia sp. UNC404CL21Col

 Score =  259 bits (662), Expect = 6e-74
 Identities = 150/313 (47%), Positives = 193/313 (61%), Gaps = 23/313 (7%)

Query: 8   RVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGEATKFSQF 67
           R +HGV+LLDKP G SSNDAL +VKRL  A+KAGHTG LDPLATG+LP+C GEATKFSQ 
Sbjct: 15  REVHGVLLLDKPIGWSSNDALIRVKRLLWAKKAGHTGTLDPLATGLLPLCFGEATKFSQD 74

Query: 68  LLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVHVDYDTLLACIAKFRGETDQVPSMFSA 127
           LLD+DK Y  I +LG +T T+D++G+V+  RPV V  + L A IA+F GE DQVP M SA
Sbjct: 75  LLDADKTYETIVRLGIKTSTADAEGEVLSERPVSVTPEQLQAVIARFVGEIDQVPPMHSA 134

Query: 128 LKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVE----MEVHCSKGTYIRTIV 183
           LK  G+PLYEYAR G  V R AR++T++ I++   + +  E    + V CSKGTYIRT+ 
Sbjct: 135 LKKDGKPLYEYARAGQTVERAARRVTIHSIDVLGTDLESAEPTITLRVSCSKGTYIRTLG 194

Query: 184 DDLGEMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLLLPM 243
           +D+GE LGCG H+  LRR  V N      VTLE L+A  E A  +          LL P+
Sbjct: 195 EDIGEALGCGGHLVALRRTQVGNLTLSGAVTLEALDAAAEDARTE----------LLAPV 244

Query: 244 DTAVEALPEVNVIPELMTLIQHGQAVQVSGA-PSDGMVRITGGEQKL-------FLGVGE 295
           D  ++ LP V +  E      HGQ + +  A P+   VR+ G    +        LGV  
Sbjct: 245 DALLQTLPRVELDAEESRRFLHGQRLPLRLALPNADQVRVYGVRDAIAAEATASLLGVAA 304

Query: 296 IDDNGKVAPKRLV 308
               G + P+RLV
Sbjct: 305 W-QGGVLRPERLV 316