Pairwise Alignments

Query, 312 a.a., tRNA pseudouridine(55) synthase TruB from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., tRNA pseudouridine synthase B from Burkholderia phytofirmans PsJN

 Score =  251 bits (641), Expect = 2e-71
 Identities = 142/311 (45%), Positives = 186/311 (59%), Gaps = 18/311 (5%)

Query: 8   RVIHGVILLDKPTGISSNDALQKVKRLYGAEKAGHTGALDPLATGMLPICLGEATKFSQF 67
           R + GV+LLDKP G+SSNDAL + KRLY A+KAGHTG LDPLATG+LP+C GEATKFSQ 
Sbjct: 12  RALDGVLLLDKPLGLSSNDALIRAKRLYLAKKAGHTGTLDPLATGLLPLCFGEATKFSQD 71

Query: 68  LLDSDKRYRVIAKLGERTDTSDSDGQVVQTRPVHVDYDTLLACIAKFRGETDQVPSMFSA 127
           LL+++K Y    +LG RT T D++G+ + TR V  D   +LA +  F GE  QVP M+SA
Sbjct: 72  LLEANKTYEATMRLGVRTTTGDAEGEAIDTREVTCDEAAILAVLPTFLGEITQVPPMYSA 131

Query: 128 LKYQGRPLYEYARQGIEVPREARKITVYEIELHRFEGDEVEMEVHCSKGTYIRTIVDDLG 187
           LK  G+PLYEYAR G  V RE R++T+  +E+      +V   V CSKGTY+RT+ +D+G
Sbjct: 132 LKRDGKPLYEYARAGQTVEREGRQVTILALEMLACALPDVTFRVTCSKGTYVRTLAEDIG 191

Query: 188 EMLGCGAHVTMLRRVGVANYPYERMVTLEQLNALVEQAHRDEKAVADVLDPLLLPMDTAV 247
           E LGCGAH+  LRR GV     +  VTL+ L+   E             D  L P+D  +
Sbjct: 192 EALGCGAHLVALRRTGVGALTLDNSVTLDALSDAAESER----------DAWLQPVDALL 241

Query: 248 EALPEVNVIPELMTLIQHGQAVQVSGAPSDG------MVRITGGEQKLFLGVGEIDDNGK 301
              P V +  +      HGQ +++S     G       VR+   EQ   LGV +    G 
Sbjct: 242 STFPLVRLNEDATRRFLHGQRLKLSELTITGDAVNAPRVRVY-AEQGRLLGVAK-QGEGV 299

Query: 302 VAPKRLVVYGE 312
           +AP+RLVV  E
Sbjct: 300 LAPERLVVTTE 310