Pairwise Alignments

Query, 132 a.a., ribosome-binding factor A from Vibrio cholerae E7946 ATCC 55056

Subject, 111 a.a., 30S ribosome-binding factor RbfA from Parabacteroides merdae CL09T00C40

 Score = 48.5 bits (114), Expect = 3e-11
 Identities = 32/110 (29%), Positives = 61/110 (55%), Gaps = 4/110 (3%)

Query: 4   EFSRTQRVAQQLQKELAMILQREVRDSRLGMVTISDVEVSRDLAYAKVFVTFLCIGEQTP 63
           E +R  ++ + LQKEL+ I Q++ +     ++++S V VS DL+ A+ +++         
Sbjct: 2   ESTRLSKIERLLQKELSDIFQKQTQAMHGILISVSVVRVSPDLSVARAYLSI--FPSDKS 59

Query: 64  ESCLAALREHEVQIRMMLGKQIR--LRLTPEIRFYYDNTLVEGMRMSNLV 111
           +  L  +R +   IR  LG++IR  +R  PE+ F+ D++L     + NL+
Sbjct: 60  KEMLENIRANTKAIRFDLGQRIRKQVRKIPELTFFIDDSLDYIENIDNLL 109