Pairwise Alignments

Query, 132 a.a., ribosome-binding factor A from Vibrio cholerae E7946 ATCC 55056

Subject, 110 a.a., ribosome-binding factor A (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 49.7 bits (117), Expect = 1e-11
 Identities = 28/100 (28%), Positives = 59/100 (59%), Gaps = 4/100 (4%)

Query: 4   EFSRTQRVAQQLQKELAMILQREVRDSRLGMVTISDVEVSRDLAYAKVFVTFLCIGEQTP 63
           E +R  ++++ LQKEL+ I   + +     ++++S V +S D++ A+V+++      +  
Sbjct: 2   ETTRQNKISRLLQKELSEIFLLQTKAMPGILISVSAVRISPDMSIARVYLSVF--PSEKA 59

Query: 64  ESCLAALREHEVQIRMMLGKQIR--LRLTPEIRFYYDNTL 101
           E  +  + E+   IR  LG ++R  LR+ PE++F+ D++L
Sbjct: 60  EEMVKNINENMKSIRFELGTRVRHQLRIIPELKFFVDDSL 99