Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 839 a.a., Translation initiation factor 2 from Pseudomonas fluorescens FW300-N2E2

 Score =  844 bits (2181), Expect = 0.0
 Identities = 470/900 (52%), Positives = 605/900 (67%), Gaps = 64/900 (7%)

Query: 1   MTQITVKALSEEIGTPVDRLLEQLADAGMNKAVADHVSEDEKQKLLAHLRKEHGDATGSE 60
           MTQ+TVK L++E+ TPV+RLL+Q+ +AG+    A+                EH   T SE
Sbjct: 1   MTQVTVKQLADEVKTPVERLLQQMREAGLPHTAAE----------------EH--VTDSE 42

Query: 61  PTRLTLQRKTRSTLSVNAGGGKSKNVQVEVRKKRTYVKRSSVEDEATREAEEAAMRAAEE 120
              L    K+            S   +VE  +K T  ++++           + +R A  
Sbjct: 43  KQSLLTHLKS------------SHKAKVEEPRKITLQRKTT-----------STLRVAGS 79

Query: 121 QAKREAEEAAQRAAEEKAKREAEEAAKREAEAKRMAEEKAKRETQAATQPRSDEEKLKQE 180
           ++    E   ++   +++  E E   KRE E +R  E  A+++ +   + R++EE  +Q 
Sbjct: 80  KSI-SVEVRKKKVFVQRSPEEIEAERKREQEERRAVENAARQKAEEEAKRRAEEEARRQP 138

Query: 181 AARKEAEALKRRQEEEARRKAEEESRRQLEKVRELAEKNGERWSADKETVGDMQENTDYH 240
           AA + A             +A E      E VRE A       +       D Q   D  
Sbjct: 139 AAAQAAPV-----------EAVEAVAPVAEPVREAAPVVAAAPAPADTRKRDEQRRPD-- 185

Query: 241 VTTSRYAREAEDEADLHEEGARRRST---KANKRKMSSRDDNQERDSRPRGGKAGRKGRI 297
               R         D   + A  R++   KA   +++ R  ++E D   RGG+   K ++
Sbjct: 186 --KPRADDNRRGSGDGERKNAPHRASVKEKAPAPRVAPRTTDEESDGFRRGGRG--KAKL 241

Query: 298 NKPMSMQHGFDKTAVVAKADVVVGETIVVSELAQKMSVKATEVIKVMMKMGAMATINQVI 357
            K  +  HGF         +V +GETI V +LAQ+MSVKA E+IK M K+G  ATINQV+
Sbjct: 242 KKRNA--HGFQSPTGPVVREVKIGETITVGDLAQQMSVKAAEIIKFMFKLGTPATINQVL 299

Query: 358 DQETAQLVAEEMGHKVVLRKENELEEAILSDRDDKFEEVSRAPVVTIMGHVDHGKTSTLD 417
           DQETAQLVAEE+GHKV L  +  LE+++      + E VSRAPVVT+MGHVDHGKTS LD
Sbjct: 300 DQETAQLVAEELGHKVTLVSDTALEDSLAESLKFEGEAVSRAPVVTVMGHVDHGKTSLLD 359

Query: 418 YIRRTHVASGEAGGITQHIGAYHVETPNGMITFLDTPGHAAFTAMRARGAQATDIVVLVV 477
           YIRR  VA+GEAGGITQHIGAYHVET  GM+TFLDTPGHAAFTAMRARGA+ATDIV+LVV
Sbjct: 360 YIRRAKVAAGEAGGITQHIGAYHVETDRGMVTFLDTPGHAAFTAMRARGAKATDIVILVV 419

Query: 478 AADDGVMPQTVEAIQHAKAAGVPLIVAVNKIDKDTANPDNVKTELSQYNVMPEEWGGDNM 537
           AADDGVMPQT+EA+QHA+AAGVPL+VAVNKIDK  A+ D +++ELS + V  EEWGGD  
Sbjct: 420 AADDGVMPQTIEAVQHAQAAGVPLVVAVNKIDKPGADLDRIRSELSVHGVTSEEWGGDTP 479

Query: 538 FVHISAKQGTNIDGLLEAILLQAEVLELKAVKQGMASGVVIESRLDKGRGPVATVLVQSG 597
           FV +SAK GT +D LLEA+LLQAEVLEL A       GVV+ESRLDKGRGPVATVLVQ G
Sbjct: 480 FVPVSAKMGTGVDELLEAVLLQAEVLELTATPSAPGRGVVVESRLDKGRGPVATVLVQDG 539

Query: 598 TLRKGDIVLCGQEYGRVRAMRDEVGNEVEEAGPSIPVEILGLSGVPAAGDEATVVRDERK 657
           TLR+GD+VL G  YGRVRAM DE G  ++EAGP+IPVEILGL G P AGDE +VV DE+K
Sbjct: 540 TLRQGDMVLVGSNYGRVRAMLDENGKSIKEAGPAIPVEILGLDGTPDAGDEMSVVADEKK 599

Query: 658 AREVANYRAGKFREVKLARQQKSKLENMFSNMTAGDVAELNIVLKADVQGSVEAIADSLT 717
           AREVA +R GKFREVKLAR    KLEN+F NM   +   LNIVLK+DV+GS+EA+  +L 
Sbjct: 600 AREVALFRQGKFREVKLARAHAGKLENIFENMGQEEKKTLNIVLKSDVRGSLEALNGALN 659

Query: 718 KLSTDEVKVNIVGSGVGGITETDAVLAAASNAIVVGFNVRADASARRMIEAENIDLRYYS 777
            L  DEV+V +VG GVGGITE+DA LA ASNA++ GFNVRADA AR+++E E +D+RYY+
Sbjct: 660 GLGNDEVQVRVVGGGVGGITESDANLALASNAVLFGFNVRADAGARKIVEQEGLDMRYYN 719

Query: 778 IIYQLIDEVKQAMSGMLSPEFKQEIIGLAEVRDVFKSPKLGAIAGCMVTEGVIKRNAPIR 837
           +IY +I++VK+A++GML  + ++ I+G+AEVRDVF+SPK GAIAGCMV EGV+ RN PIR
Sbjct: 720 VIYDIIEDVKKALTGMLGSDVRENILGVAEVRDVFRSPKFGAIAGCMVIEGVVHRNRPIR 779

Query: 838 VLRDNVVIYEGELESLRRFKDDVAEVKNGYECGIGVKNYNDVRVGDQIEVFETIEIQRTI 897
           VLR+++VI+EGELESLRRFKDD +EV+ G ECGIGVK+YNDV+VGD+IEVFE +++ R++
Sbjct: 780 VLREDIVIFEGELESLRRFKDDASEVRAGMECGIGVKSYNDVKVGDKIEVFEKVQVARSL 839