Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., selenocysteine-specific elongation factor SelB from Pseudomonas stutzeri RCH2

 Score = 87.8 bits (216), Expect = 2e-21
 Identities = 78/253 (30%), Positives = 118/253 (46%), Gaps = 24/253 (9%)

Query: 401 VVTIMGHVDHGKTSTLDYIRRTHVASGEAG---------GITQHIGAYHVETPNGMIT-F 450
           +V   GH+DHGKT+ L  +      +G+ G         GIT  +G  + +   G +T F
Sbjct: 2   IVGTAGHIDHGKTALLQAL------TGQQGDRRREERERGITIDLGYVYADLGEGSLTGF 55

Query: 451 LDTPGHAAFTAMRARGAQATDIVVLVVAADDGVMPQTVEAIQHAKAAGV-PLIVAVNKID 509
           +D PGH  F      GA   D V+LVVAADDGVMPQT E +   +  G+   +VA+ KID
Sbjct: 56  IDVPGHERFVHNMLAGASGIDCVLLVVAADDGVMPQTREHLAIVELLGIRRALVALTKID 115

Query: 510 K-DTANPDNVKTELSQYNVMPEEWGGDNMFVHISAKQGTNIDGLLEAILLQAEVLELKAV 568
           + +TA    V+ ++    V     G       +S+ +G  +D L  A++ +A     ++ 
Sbjct: 116 RVETARIAEVQRQIENLLVTGPLAGAP--IFPVSSIRGDGVDALRTALIEEAARTAARSA 173

Query: 569 KQGMASGVVIESRLDKGRGPVATVLVQSGTLRKGDIVLCGQEYGRVRAMRDEVGN-EVEE 627
             G     +  +    G G V T    +G +R GD +L G    RVR       N E +E
Sbjct: 174 -SGHFRLAIDRAFSVTGAGVVVTGTAFAGRVRIGDELLLGPTGKRVRVRGLHAQNREADE 232

Query: 628 --AGPSIPVEILG 638
             AG  + + + G
Sbjct: 233 AHAGQRVALNLAG 245