Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 902 a.a., Translation initiation factor 2 from Xanthomonas campestris pv. campestris strain 8004

 Score =  834 bits (2154), Expect = 0.0
 Identities = 474/918 (51%), Positives = 611/918 (66%), Gaps = 42/918 (4%)

Query: 3   QITVKALSEEIGTPVDRLLEQLADAGMNKAVADHV-SEDEKQKLLAHLRKEHG------D 55
           Q T++ L+E + TPVD+LL QLA+AGM  +  D V +  EK KLL  LR+ HG      +
Sbjct: 4   QTTIRKLAELVNTPVDKLLVQLAEAGMKFSGPDQVVTSTEKMKLLGFLRRTHGKADTPAE 63

Query: 56  ATGSEPTRLTLQRKTRSTLSVNAGGGKSKNVQVEVRKKRTYVKRSSV-----------ED 104
           A      ++TL R+    ++VNAG  K+  V VEVR+KRTYVK  +            E+
Sbjct: 64  AASEAAKKITLNRRKLQEVTVNAGRTKT-TVNVEVRQKRTYVKSENEGSGRAAPMTPDEE 122

Query: 105 EATREAEEAAMRAAE-EQAKREAEEAAQRAAEEKAKREAEEAAKREAEAKRMAEEKAKRE 163
            A   A+ AA R    ++ +R AE    R    + KR+ E+AAK   EA+R A E+A   
Sbjct: 123 RADILAKLAASRQRNLDEQQRLAESDRARDEAIQRKRDEEQAAKDRVEAERKAAEEAAAA 182

Query: 164 TQAATQPRSDEEKLKQEAARKEAEALKRRQEEEARRKAEEESRRQLEKVRELAEKNGERW 223
             A     +        AAR  +          A R A         +    A  +    
Sbjct: 183 ASAPAPVAAAPAPSSAPAARAPSSP------SSAPRPARPAGASPASRPATPARPDDRNN 236

Query: 224 SADKETVGD--MQENTDYHVTTSRYAREAEDEADLHEEGARRRSTKANKRKMSSRDDNQE 281
           +A  +T G   M    +    T R+A +      LH   A R + ++N R   +      
Sbjct: 237 AAKHKTRGSHVMVAGVEDDDATKRFAGQ------LHLSAADR-ARRSNVRGKPTGRPGSS 289

Query: 282 RDSRPRGGKAGRKGRINKPMSMQHGFDKTAVVAKADVVVGETIVVSELAQKMSVKATEVI 341
              R  GG+       N+  S  HGF++       +V +GETI V++LAQK+++K  +V+
Sbjct: 290 SSRRNDGGRGS-----NQSNSGPHGFERPTAPVVREVAIGETITVADLAQKLALKGGDVV 344

Query: 342 KVMMKMGAMATINQVIDQETAQLVAEEMGHKVVLRKENELEEAILSDRDD-KFEEVSRAP 400
           K + KMG MATI Q ID +TA LV EE+GHK V     + E+A+L+  +D + E  SR P
Sbjct: 345 KALFKMGVMATITQSIDHDTAALVTEELGHKAVRADNADFEDALLAHAEDAQGETTSRPP 404

Query: 401 VVTIMGHVDHGKTSTLDYIRRTHVASGEAGGITQHIGAYHVETPNGMITFLDTPGHAAFT 460
           VVTIMGHVDHGKTS LDYIRRT +ASGEAGGITQHIGAYHVET  G+I+FLDTPGHAAFT
Sbjct: 405 VVTIMGHVDHGKTSLLDYIRRTKIASGEAGGITQHIGAYHVETGRGVISFLDTPGHAAFT 464

Query: 461 AMRARGAQATDIVVLVVAADDGVMPQTVEAIQHAKAAGVPLIVAVNKIDKDTANPDNVKT 520
           +MRARGA+ TDIVVLVVAADDGVMPQT EA+ HAKAAGVPLIVAVNKIDK  A+P  VK 
Sbjct: 465 SMRARGAKITDIVVLVVAADDGVMPQTKEAVAHAKAAGVPLIVAVNKIDKAGADPLRVKN 524

Query: 521 ELSQYNVMPEEWGGDNMFVHISAKQGTNIDGLLEAILLQAEVLELKAVKQGMASGVVIES 580
           EL   NV+ E++GGD  F+ +SAK GT +D LL+AI LQAEVLELKAV  G ASG VIES
Sbjct: 525 ELLAENVVAEDFGGDTQFIEVSAKVGTGVDTLLDAISLQAEVLELKAVADGRASGTVIES 584

Query: 581 RLDKGRGPVATVLVQSGTLRKGDIVLCGQEYGRVRAMRDEVGNEVEEAGPSIPVEILGLS 640
            LDKGRGPVATVLVQ G L++GD ++CG +YGRVRA+ DE G++   AGPSIPV++LGLS
Sbjct: 585 SLDKGRGPVATVLVQQGALKRGDYLVCGIQYGRVRALFDETGHQPASAGPSIPVQVLGLS 644

Query: 641 GVPAAGDEATVVRDERKAREVANYRAGKFREVKLARQQKSKLENMFSNMTAGDVAE-LNI 699
           GVP AGD+  VV DER A++VA  R  K RE +L     +++E++ + M  G+  + LN+
Sbjct: 645 GVPEAGDDFVVVDDERLAKDVAQQRETKRRESRLVASATNRMEDILAQMGKGEGQQVLNL 704

Query: 700 VLKADVQGSVEAIADSLTKLSTDEVKVNIVGSGVGGITETDAVLAAASNAIVVGFNVRAD 759
           V+KADVQGSVEA+  SL  LS D++++N++ SGVGGITE+DA  AAAS A ++GFNVRAD
Sbjct: 705 VIKADVQGSVEALKQSLVALSNDDIRINVIHSGVGGITESDANSAAASKATIIGFNVRAD 764

Query: 760 ASARRMIEAENIDLRYYSIIYQLIDEVKQAMSGMLSPEFKQEIIGLAEVRDVFKSPKLGA 819
           ASAR+++E+  IDLRY+SIIY +ID+VKQ  SG+L  E ++EIIG+A+VRDVF+S K GA
Sbjct: 765 ASARKIVESNGIDLRYFSIIYDVIDQVKQVASGLLGVEIREEIIGIAQVRDVFRSSKFGA 824

Query: 820 IAGCMVTEGVIKRNAPIRVLRDNVVIYEGELESLRRFKDDVAEVKNGYECGIGVKNYNDV 879
           +AGCM+ EGV+KR+ PIRVLRD+VV++EGELESLRRFK++V EV+NG ECGIGVK YNDV
Sbjct: 825 VAGCMIIEGVVKRSKPIRVLRDSVVVFEGELESLRRFKENVDEVRNGTECGIGVKAYNDV 884

Query: 880 RVGDQIEVFETIEIQRTI 897
           + GDQIE FE IE+ RT+
Sbjct: 885 KAGDQIECFERIEVARTL 902