Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 873 a.a., Initiation factor 2 (NCBI) from Rhodospirillum rubrum S1H

 Score =  675 bits (1742), Expect = 0.0
 Identities = 395/844 (46%), Positives = 529/844 (62%), Gaps = 49/844 (5%)

Query: 81  GKSKNVQVEVRKKR-------------TYVKRSSVEDEA-TREAEEAAMRAAEEQAKREA 126
           G+SK VQVEVRK +               ++ ++V D   T E  +   RA EE   R A
Sbjct: 44  GRSKVVQVEVRKSKKRPATSGDPAAVQNAIRGAAVFDTGLTSEEMQGRRRAVEEAVVRAA 103

Query: 127 EEAAQRAAEE--KAKREAEEAA-KREAEAKRMAEEKAKRETQAAT-----QPRSD-EEKL 177
           EEA ++  EE  + +RE EEA  K E EA+R AEE+A R  +AA       P  D     
Sbjct: 104 EEAERKRLEEIERRRREEEEARLKVEEEARRKAEEEAARAARAAAGDAAETPAEDVAPAA 163

Query: 178 KQEAARKEAEALK------RRQEEEARRKAEEESRRQLEKVRELAEKNGERWSADKETVG 231
            Q AA  +A A        R   + + R A E  R   E  R             +  V 
Sbjct: 164 PQVAAAPQAPAPAPTRSGPRPGPDASARPAAEAPRSPTEAPRP----------GPRRVVE 213

Query: 232 DMQENTDYHVTTSRYAREAEDEADLHEEGARRRSTKANKRKMSSRDDNQERDSRPRGGKA 291
           D  ++    V  SR A   +       E  RR      K  +++  +  ER  R R   A
Sbjct: 214 DEDDDAPKKVA-SRGAVPPKPAPAKRVEPKRR-----GKLTVTAALEGDERSERGRSVAA 267

Query: 292 GRKGRINKPMSMQHGFDKTAVVAKADVVVGETIVVSELAQKMSVKATEVIKVMMKMGAMA 351
            R+ +  +    +       VV   +V++ + I V ELA +M+ +   VIK +MKMG MA
Sbjct: 268 LRRAKQKEKRKAEMMSPAERVVR--EVIIPDVINVQELANRMAERGANVIKTLMKMGVMA 325

Query: 352 TINQVIDQETAQLVAEEMGHKVVLRKENELEEAILSDRDDKFEEV-SRAPVVTIMGHVDH 410
           TINQ ID +TA+LV  E GH      ++++E  +     D  E + SR PVVT+MGHVDH
Sbjct: 326 TINQTIDADTAELVVAEFGHASRRVSDSDVELGLGDALPDGTEVLTSRPPVVTVMGHVDH 385

Query: 411 GKTSTLDYIRRTHVASGEAGGITQHIGAYHVETPNGM-ITFLDTPGHAAFTAMRARGAQA 469
           GKTS LD +R+T VA GEAGGITQHIGAY V T +G  ITF+DTPGHAAFTAMRARGA+ 
Sbjct: 386 GKTSLLDAMRKTDVAGGEAGGITQHIGAYQVVTKSGQKITFIDTPGHAAFTAMRARGARV 445

Query: 470 TDIVVLVVAADDGVMPQTVEAIQHAKAAGVPLIVAVNKIDKDTANPDNVKTELSQYNVMP 529
           TDIVVLVVAA+DG+MPQT+EAI+HA+AA VP++VA+NK+D   ANP+ V+T+L Q+ ++ 
Sbjct: 446 TDIVVLVVAANDGIMPQTIEAIRHARAAEVPVVVAINKMDLPDANPEKVRTDLLQHELVV 505

Query: 530 EEWGGDNMFVHISAKQGTNIDGLLEAILLQAEVLELKAVKQGMASGVVIESRLDKGRGPV 589
           E+ GGD + V +SAK+  N+D L EAILLQ+E+L+LKA       GVVIE++++KGRG V
Sbjct: 506 EQLGGDVLNVEVSAKRRLNLDKLEEAILLQSEILDLKANADRACQGVVIEAKVEKGRGSV 565

Query: 590 ATVLVQSGTLRKGDIVLCGQEYGRVRAMRDEVGNEVEEAGPSIPVEILGLSGVPAAGDEA 649
           AT+LVQ GTL+ GDI + G E+GRVRA+ D+ GN V  A P++PVE+LG  G PAAGD+ 
Sbjct: 566 ATILVQKGTLKVGDIFVAGAEWGRVRALVDDHGNRVIAATPAMPVEVLGFQGTPAAGDDF 625

Query: 650 TVVRDERKAREVANYRAGKFREVKLARQQKSKLENMFSNMTAGDVAELNIVLKADVQGSV 709
            VV DE +ARE++ YR  K R+ +  R  +  +E MF  + AG+  EL +V+KADVQGSV
Sbjct: 626 IVVEDENRAREISEYRQRKDRDAQQVRTARGTMEQMFERIQAGEARELPVVIKADVQGSV 685

Query: 710 EAIADSLTKLSTDEVKVNIVGSGVGGITETDAVLAAASNAIVVGFNVRADASARRMIEAE 769
           EA+  +L KL  D+VK+ ++ + VG I E+D  LA AS+ +++GFNVRA+  AR M   +
Sbjct: 686 EALVGTLEKLGNDDVKIRVLHAAVGAINESDVTLAKASDGLIIGFNVRANPQAREMARRD 745

Query: 770 NIDLRYYSIIYQLIDEVKQAMSGMLSPEFKQEIIGLAEVRDVFKSPKLGAIAGCMVTEGV 829
            ID+RY+SIIY + DEVK  +SGML P FK+  IG A +R+VF   K+G +AGCMVTEG+
Sbjct: 746 GIDIRYHSIIYAVADEVKALLSGMLEPTFKESFIGYAAIREVFNITKVGKVAGCMVTEGI 805

Query: 830 IKRNAPIRVLRDNVVIYEGELESLRRFKDDVAEVKNGYECGIGVKNYNDVRVGDQIEVFE 889
           +KR A +R+LRDNVVI+EG L  L+RFKDDV EV+ GYECG+  + YND++VGD IE FE
Sbjct: 806 VKRGAKVRLLRDNVVIHEGSLSQLKRFKDDVREVREGYECGMSFETYNDIQVGDVIECFE 865

Query: 890 TIEI 893
             E+
Sbjct: 866 MEEV 869