Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 885 a.a., translation initiation factor IF-2 (RefSeq) from Shewanella loihica PV-4

 Score = 1172 bits (3031), Expect = 0.0
 Identities = 624/902 (69%), Positives = 724/902 (80%), Gaps = 22/902 (2%)

Query: 1   MTQITVKALSEEIGTPVDRLLEQLADAGMNKAVADHVSEDEKQKLLAHLRKEHGDATGSE 60
           M   TV  L+EE+G   DRL+EQ ++AG+ K+  D VSEDEKQKLL  L+K+HG    S 
Sbjct: 1   MADTTVAKLAEEVGKSADRLVEQFSEAGIKKSKTDTVSEDEKQKLLEFLKKQHGG--DSA 58

Query: 61  PTRLTLQRKTRSTLSVNAGGGKSKNVQVEVRKKRTYVKRSSVEDEATREAEEAAMRAAEE 120
           PT++TLQRK+ STLSV+  GG+SK+++VEVRKKRT+VKR      A  EAE  A   AE 
Sbjct: 59  PTKMTLQRKSISTLSVSGSGGQSKDIKVEVRKKRTFVKRDVA---AEAEAEAKAKAEAEA 115

Query: 121 QAKREAEEAAQRAAEEKAKREAEEAAKREAEAKRMAEEKAKRETQAATQPRSDEEKLKQE 180
           +A  EAE  A+  AE KAK EAE AAK  A+AK  AE KAK+   AA    + EE  +++
Sbjct: 116 KAAAEAEAKAKADAEAKAKAEAEAAAK--AKAKAEAEAKAKK---AAEGKPAAEETAEEK 170

Query: 181 AARKEAEALKRRQEEEARRKAEEESRRQLEKVRELAEKNGERWSADKETVGDMQENTDYH 240
           AA+ E   L   +E  A+ KA+EE++   E+ R LAE+N +RW+ ++    + + + D+H
Sbjct: 171 AAKVEEARLLAAKEAAAKAKADEEAKAAAEEARRLAEENEKRWAEEERLRKESENSADHH 230

Query: 241 VTTSRYAREAEDEADLHEEGARRRSTKANKRKMSSRDDNQERDSRPRGGKAGRKGRINK- 299
           VTTS  AR AED AD   E   RR+ K    K       +E   + RGGK  R GR N+ 
Sbjct: 231 VTTSTEARAAEDSADRDAERRGRRARKPAGGK-------KEPIGKKRGGKEARGGRNNRN 283

Query: 300 ----PMSMQHGFDKTAVVAKADVVVGETIVVSELAQKMSVKATEVIKVMMKMGAMATINQ 355
               P SM HGF+K A     DV +GET+ V+ELAQKM+VKATE+IK MMKMG+M TINQ
Sbjct: 284 QRNAPESMDHGFNKPAAAVTRDVTIGETVTVAELAQKMAVKATEIIKQMMKMGSMVTINQ 343

Query: 356 VIDQETAQLVAEEMGHKVVLRKENELEEAILSDRDDKFEEVSRAPVVTIMGHVDHGKTST 415
           V+DQETAQLVAEEMGHKVVL +ENELE  +L+DRD   +   RAPVVTIMGHVDHGKTS 
Sbjct: 344 VLDQETAQLVAEEMGHKVVLTRENELEHQVLADRDGNVKVEPRAPVVTIMGHVDHGKTSL 403

Query: 416 LDYIRRTHVASGEAGGITQHIGAYHVETPNGMITFLDTPGHAAFTAMRARGAQATDIVVL 475
           LDYIRR  VASGEAGGITQHIGAYHVET NGMITFLDTPGHAAFTAMRARGA+ATDIVVL
Sbjct: 404 LDYIRRAKVASGEAGGITQHIGAYHVETDNGMITFLDTPGHAAFTAMRARGAKATDIVVL 463

Query: 476 VVAADDGVMPQTVEAIQHAKAAGVPLIVAVNKIDKDTANPDNVKTELSQYNVMPEEWGGD 535
           VVAADDGVMPQT+EAIQHAKA GVPLIVAVNKIDK  A+PD VK+ELSQ+ VM E+WGG+
Sbjct: 464 VVAADDGVMPQTIEAIQHAKAGGVPLIVAVNKIDKPEADPDRVKSELSQHGVMSEDWGGN 523

Query: 536 NMFVHISAKQGTNIDGLLEAILLQAEVLELKAVKQGMASGVVIESRLDKGRGPVATVLVQ 595
           NMFVH+SAK G  ID LLE ILL+AEVLELKAV++GMA+GVV+ES+LDKGRGPVAT+LVQ
Sbjct: 524 NMFVHVSAKSGEGIDELLEGILLEAEVLELKAVREGMAAGVVVESKLDKGRGPVATILVQ 583

Query: 596 SGTLRKGDIVLCGQEYGRVRAMRDEVGNEVEEAGPSIPVEILGLSGVPAAGDEATVVRDE 655
            GTL++GDIVLCG EYG+VRAM+DE G  + EAGPSIPVEILGLSGVP+AGDEATVVRDE
Sbjct: 584 EGTLKQGDIVLCGLEYGKVRAMKDENGKSITEAGPSIPVEILGLSGVPSAGDEATVVRDE 643

Query: 656 RKAREVANYRAGKFREVKLARQQKSKLENMFSNMTAGDVAELNIVLKADVQGSVEAIADS 715
           RKAREVA YR GKFR+VKLARQQKSKLENMF+NMT G+V ELNIVLKADVQGS+EAI+DS
Sbjct: 644 RKAREVALYRQGKFRDVKLARQQKSKLENMFANMTEGEVQELNIVLKADVQGSLEAISDS 703

Query: 716 LTKLSTDEVKVNIVGSGVGGITETDAVLAAASNAIVVGFNVRADASARRMIEAENIDLRY 775
           L KLSTDEVKVNI+ SGVGG+TETDA LAAASNAI+VGFNVRADA AR+ IE+E++DLRY
Sbjct: 704 LNKLSTDEVKVNIIASGVGGLTETDATLAAASNAIMVGFNVRADAQARKTIESESVDLRY 763

Query: 776 YSIIYQLIDEVKQAMSGMLSPEFKQEIIGLAEVRDVFKSPKLGAIAGCMVTEGVIKRNAP 835
           YS+IY LIDEVK AM GML+PEFKQEIIGLAEVRDVFKSPK+GAIAGCMVTEG IKR+AP
Sbjct: 764 YSVIYHLIDEVKAAMGGMLAPEFKQEIIGLAEVRDVFKSPKIGAIAGCMVTEGTIKRSAP 823

Query: 836 IRVLRDNVVIYEGELESLRRFKDDVAEVKNGYECGIGVKNYNDVRVGDQIEVFETIEIQR 895
           IRVLRDNVVI+EGELESLRRFKDDV EV+NG ECGIGVKNYNDV+VGDQIEVFET+EI R
Sbjct: 824 IRVLRDNVVIFEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVKVGDQIEVFETVEIAR 883

Query: 896 TI 897
           T+
Sbjct: 884 TL 885