Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 900 a.a., Probable translation initiation factor if-2 InfB from Mycobacterium tuberculosis H37Rv

 Score =  557 bits (1435), Expect = e-162
 Identities = 311/635 (48%), Positives = 431/635 (67%), Gaps = 30/635 (4%)

Query: 287 RGGKAGRKGRINKPMSMQHGFDKTAVVAKADVVV----GETI------VVSELAQKMSVK 336
           R G A R+GR +K    Q  +D         V +    GETI       +S+ A K+   
Sbjct: 269 RPGGAPRRGRKSKRQKRQE-YDSMQAPVVGGVRLPHGNGETIRLARGASLSDFADKIDAN 327

Query: 337 ATEVIKVMMKMGAMATINQVIDQETAQLVAEEMGHKV-VLRKENE----LEEAILSDRDD 391
              +++ +  +G M T  Q +  ET +L+  EM + V V+  E+E    LE   LS  +D
Sbjct: 328 PAALVQALFNLGEMVTATQSVGDETLELLGSEMNYNVQVVSPEDEDRELLESFDLSYGED 387

Query: 392 KFEEVS---RAPVVTIMGHVDHGKTSTLDYIRRTHVASGEAGGITQHIGAYHV----ETP 444
           +  E     R PVVT+MGHVDHGKT  LD IR+ +V   EAGGITQHIGAY V    +  
Sbjct: 388 EGGEEDLQVRPPVVTVMGHVDHGKTRLLDTIRKANVREAEAGGITQHIGAYQVAVDLDGS 447

Query: 445 NGMITFLDTPGHAAFTAMRARGAQATDIVVLVVAADDGVMPQTVEAIQHAKAAGVPLIVA 504
             +ITF+DTPGH AFTAMRARGA+ATDI +LVVAADDGVMPQTVEAI HA+AA VP++VA
Sbjct: 448 QRLITFIDTPGHEAFTAMRARGAKATDIAILVVAADDGVMPQTVEAINHAQAADVPIVVA 507

Query: 505 VNKIDKDTANPDNVKTELSQYNVMPEEWGGDNMFVHISAKQGTNIDGLLEAILLQAE-VL 563
           VNKIDK+ A+P  ++ +L++Y ++PEE+GGD MFV ISAKQGTNI+ L EA+LL A+  L
Sbjct: 508 VNKIDKEGADPAKIRGQLTEYGLVPEEFGGDTMFVDISAKQGTNIEALEEAVLLTADAAL 567

Query: 564 ELKAVKQGMASGVVIESRLDKGRGPVATVLVQSGTLRKGDIVLCGQEYGRVRAMRDEVGN 623
           +L+A     A GV IE+ LD+GRGPVATVLVQ GTLR GD V+ G  YGRVR M DE G 
Sbjct: 568 DLRANPDMEAQGVAIEAHLDRGRGPVATVLVQRGTLRVGDSVVAGDAYGRVRRMVDEHGE 627

Query: 624 EVEEAGPSIPVEILGLSGVPAAGDEATVVRDERKAREVANYRAGKFREVKLARQQKS-KL 682
           +VE A PS PV+++G + VP AGD   VV ++R AR++A+ R+ + R    AR +K   L
Sbjct: 628 DVEVALPSRPVQVIGFTSVPGAGDNFLVVDEDRIARQIADRRSARKRNALAARSRKRISL 687

Query: 683 ENMFSNMTAGDVAELNIVLKADVQGSVEAIADSLTKLST-DEVKVNIVGSGVGGITETDA 741
           E++ S +   + ++LN++LK D  G+VEA+ ++L  +   DEV + ++  GVGGITET+ 
Sbjct: 688 EDLDSALK--ETSQLNLILKGDNAGTVEALEEALMGIQVDDEVVLRVIDRGVGGITETNV 745

Query: 742 VLAAASNAIVVGFNVRADASARRMIEAENIDLRYYSIIYQLIDEVKQAMSGMLSPEFKQE 801
            LA+AS+A+++GFNVRA+  A  +   E +++RYYS+IYQ IDE++QA+ G+L P +++ 
Sbjct: 746 NLASASDAVIIGFNVRAEGKATELASREGVEIRYYSVIYQAIDEIEQALRGLLKPIYEEN 805

Query: 802 IIGLAEVRDVFKSPKLGAIAGCMVTEGVIKRNAPIRVLRDNVVIYEG-ELESLRRFKDDV 860
            +G AE+R +F+S K+G IAGC+VT GV++RNA  R+LRDN+V+ E   + SLRR KDDV
Sbjct: 806 QLGRAEIRALFRSSKVGLIAGCLVTSGVMRRNAKARLLRDNIVVAENLSIASLRREKDDV 865

Query: 861 AEVKNGYECGIGVKNYNDVRVGDQIEVFETIEIQR 895
            EV++G+ECG+ +  Y D++ GD IE +E ++ +R
Sbjct: 866 TEVRDGFECGLTL-GYADIKEGDVIESYELVQKER 899