Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 1079 a.a., translation initiation factor IF-2 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  651 bits (1680), Expect = 0.0
 Identities = 337/619 (54%), Positives = 444/619 (71%), Gaps = 2/619 (0%)

Query: 280  QERDSRPRGGKAGRKGRINKPMSMQHGFDKTAVVAKADVVVGETIVVSELAQKMSVKATE 339
            +E D  PRGG    KGR  + M +     +    AK  + V E I V+++A +M +K+TE
Sbjct: 462  REDDDFPRGGARRGKGRKGRDMKVATA-TQPLKAAKRKIKVEEAIRVADMAHQMGLKSTE 520

Query: 340  VIKVMMKMGAMATINQVIDQETAQLVAEEMGHKVVLRKENELEEAILSDRDDKFEEVSRA 399
            +IKV+  +G MATINQ +D ETA LVA E G++V     +E +  I  + D       R 
Sbjct: 521  IIKVLFGLGVMATINQSLDIETATLVASEFGYEVEKVGFSEDDYLIPKEEDTPETLQHRP 580

Query: 400  PVVTIMGHVDHGKTSTLDYIRRTHVASGEAGGITQHIGAYHVETPNGMITFLDTPGHAAF 459
            PVVTIMGHVDHGKTS LD IR+T+V  GEAGGITQHIGAYHV T  G I FLDTPGH AF
Sbjct: 581  PVVTIMGHVDHGKTSLLDAIRKTNVTMGEAGGITQHIGAYHVTTKKGEIVFLDTPGHEAF 640

Query: 460  TAMRARGAQATDIVVLVVAADDGVMPQTVEAIQHAKAAGVPLIVAVNKIDKDTANPDNVK 519
            TAMRARGAQ TDIVVLVVAADDGVM QT EA+ H+KAAGVP++VAVNK+DK+ ANP+ V+
Sbjct: 641  TAMRARGAQVTDIVVLVVAADDGVMEQTREAVNHSKAAGVPIMVAVNKMDKEGANPERVQ 700

Query: 520  TELSQYNVMPEEWGGDNMFVHISAKQGTNIDGLLEAILLQAEVLELKAVKQGMASGVVIE 579
             EL++  ++ E WGGD +F H+SAK    +D LLE + LQAE+LELKA     A G ++E
Sbjct: 701  RELAEMGLVSEAWGGDTVFSHVSAKTRQGLDELLELLALQAEILELKANPDKPARGHIVE 760

Query: 580  SRLDKGRGPVATVLVQSGTLRKGDIVLCGQEYGRVRAMRDEVGNEVEEAGPSIPVEILGL 639
            ++LDKGRGPVATVL+Q GTL++GD  +CG   GRVRAM ++ G +V+EAGP++PVE+ G 
Sbjct: 761  AKLDKGRGPVATVLIQEGTLKQGDTFVCGVFSGRVRAMFNDQGKKVKEAGPAMPVEVQGF 820

Query: 640  SGVPAAGDEATVVRDERKAREVANYRAGKFREVKLARQQKSKLENMFSNMTAGDVA-ELN 698
             GVP AG+E   V DE+ AR +A  RA K RE +LAR+ K  LE   S       A  LN
Sbjct: 821  EGVPEAGEEFVCVTDEKLARRIAETRAVKQREKELARESKVTLETFLSRRVDDQEALVLN 880

Query: 699  IVLKADVQGSVEAIADSLTKLSTDEVKVNIVGSGVGGITETDAVLAAASNAIVVGFNVRA 758
            +V+K+DVQGS+EAI+++L KLST++V++NI+  G G I+E+D +LA+AS+AI++GFNVR 
Sbjct: 881  LVVKSDVQGSLEAISEALRKLSTEKVRINIIHGGAGAISESDILLASASDAIIIGFNVRP 940

Query: 759  DASARRMIEAENIDLRYYSIIYQLIDEVKQAMSGMLSPEFKQEIIGLAEVRDVFKSPKLG 818
             A  + + E EN+D+R+Y IIY+L+DEVK AM GML+P  ++  +G  EVR  F  PK+G
Sbjct: 941  TAKVKDIAEQENVDIRFYDIIYKLVDEVKSAMEGMLAPVQREVYLGQVEVRQTFGVPKVG 1000

Query: 819  AIAGCMVTEGVIKRNAPIRVLRDNVVIYEGELESLRRFKDDVAEVKNGYECGIGVKNYND 878
             IAGC V +G I RNA +R+LRD VV+Y G++ SL+RFKDD+ EV  GYECG+G++N+ND
Sbjct: 1001 TIAGCHVADGKITRNAGVRLLRDGVVVYTGKITSLKRFKDDMKEVMKGYECGVGLENFND 1060

Query: 879  VRVGDQIEVFETIEIQRTI 897
            +++GD IE FE +E   T+
Sbjct: 1061 IKIGDIIEAFEMVEEAATL 1079