Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., selenocysteine-specific translation elongation factor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 83.2 bits (204), Expect = 5e-20
 Identities = 79/256 (30%), Positives = 121/256 (47%), Gaps = 24/256 (9%)

Query: 401 VVTIMGHVDHGKTS---TLDYIRRTHVASGEAGGITQHIGAYHVETPN-----GMITFLD 452
           V+   GH+DHGKTS    L  I    +   +  GIT  +G    + P      G +  +D
Sbjct: 4   VMGTAGHIDHGKTSLVRALTGIDCDRLEEEKRRGITIELGFAFCDLPGAGAGVGRLGIVD 63

Query: 453 TPGHAAFTAMRARGAQATDIVVLVVAADDGVMPQTVEAIQHAKAAGVPL-IVAVNKIDKD 511
            PGH  F      GA   D V+LV+AAD+GVMPQT E ++     G+   +VA+ K+D  
Sbjct: 64  VPGHERFVKNMVAGASGIDFVMLVIAADEGVMPQTREHLEICSLLGIRHGLVALTKVDM- 122

Query: 512 TANPDNVKTELSQYNVMPEEWG----GDNMFVHISAKQGTNIDGLLEAILLQAEVLELKA 567
               D    EL+Q +V     G    G  +F  +S+  G  +D L E + +     EL+ 
Sbjct: 123 ---VDPEWLELAQEDVAGFLAGTFLEGAPIF-PVSSTTGQGLDALREHLAMLER--ELRP 176

Query: 568 VKQGMASGVVIESRLD-KGRGPVATVLVQSGTLRKGDIVLC--GQEYGRVRAMRDEVGN- 623
           V++     + ++     KG G V T  + SG+++ GD V+   G    +VR+++   G  
Sbjct: 177 VRRSDLFRLPVDRVFTMKGHGTVVTGTMVSGSVKVGDEVVLYPGGAQTKVRSLQSHGGPV 236

Query: 624 EVEEAGPSIPVEILGL 639
           +V  AG    V + GL
Sbjct: 237 DVAPAGRRTAVNVQGL 252