Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., translation elongation factor Tu (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 74.3 bits (181), Expect = 1e-17
 Identities = 80/248 (32%), Positives = 112/248 (45%), Gaps = 43/248 (17%)

Query: 392 KFEEVSRAPVVTIMGHVDHGKTSTLDYIRRTHVAS----GEAGGITQ------------H 435
           KFE       V  +GHVDHGKT+    I  +HV +    GEA   +Q             
Sbjct: 5   KFERSKPHVNVGTIGHVDHGKTTLTAAI--SHVLAKTYGGEAKDFSQIDNAPEERERGIT 62

Query: 436 IGAYHVE--TPNGMITFLDTPGHAAFTAMRARGAQATDIVVLVVAADDGVMPQTVEAIQH 493
           I   H+E  TP+     +D PGHA +      GA   D  +LVVA+ DG MPQT E I  
Sbjct: 63  INTSHIEYDTPSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVASTDGPMPQTREHILL 122

Query: 494 AKAAGVP-LIVAVNKID--KDTANPDNVKTELSQYNVMPEEWGGDNMFVHISAKQGTNID 550
           ++  GVP +IV +NK D   D    + V+ E+ +  +   ++ GD++ V     QG+ + 
Sbjct: 123 SRQVGVPFIIVFMNKCDMVDDAELLELVEMEVREL-LSEYDFPGDDLPV----IQGSALK 177

Query: 551 GLLEAILLQAEVLELKAVKQGMASGVVIESRLDK-------------GRGPVATVLVQSG 597
            L      +A++LEL A           E  +DK             GRG V T  V+ G
Sbjct: 178 ALEGEPEWEAKILELAAALDSYIPEP--ERDIDKPFLMPIEDVFSISGRGTVVTGRVERG 235

Query: 598 TLRKGDIV 605
            +R GD V
Sbjct: 236 IVRVGDEV 243