Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 1009 a.a., protein translation initiation factor 2 IF-2 from Caulobacter crescentus NA1000

 Score =  597 bits (1539), Expect = e-174
 Identities = 323/659 (49%), Positives = 440/659 (66%), Gaps = 19/659 (2%)

Query: 258  EEGARRRSTKANKRKMSSRDDNQERDSR---------------PRGGKAGRKGRINKPMS 302
            E+  RR++   NK     +   Q R+ R                R   + R+ R  +   
Sbjct: 352  EDDDRRKNAAPNKAVSRVKGAPQRREGRLTIQAVAGDGDSADRMRSLASVRRAREREKEK 411

Query: 303  MQHGFDKTAVVAKADVVVGETIVVSELAQKMSVKATEVIKVMMKMGAMATINQVIDQETA 362
             + G  + A VA+ +VV+ + I V EL+ +M+V+  ++IK +M+ G M  IN VID +TA
Sbjct: 412  RRGGAVEQARVAR-EVVIPDVITVQELSNRMAVRGVDIIKFLMRQGVMLKINDVIDNDTA 470

Query: 363  QLVAEEMGHKVVLRKENELEEAILSDRDDKFEEVSRAPVVTIMGHVDHGKTSTLDYIRRT 422
            +LVA E GH V    E ++EE  +   D       R PVVTIMGHVDHGKTS LD +R T
Sbjct: 471  ELVATEFGHTVKRVSEADVEEGFIGADDHDEHMDLRPPVVTIMGHVDHGKTSLLDALRST 530

Query: 423  HVASGEAGGITQHIGAYHVETPNGM-ITFLDTPGHAAFTAMRARGAQATDIVVLVVAADD 481
             VA+GEAGGITQHIGAY V   +G  +TFLDTPGHAAF++MRARGA  TDIVVLVVA DD
Sbjct: 531  DVAAGEAGGITQHIGAYQVRLKDGQRVTFLDTPGHAAFSSMRARGANITDIVVLVVAGDD 590

Query: 482  GVMPQTVEAIQHAKAAGVPLIVAVNKIDKDTANPDNVKTELSQYNVMPEEWGGDNMFVHI 541
            GVMPQT+EAI+HAKAA VP+IVAVNK+DK  ++P  V  EL Q+ ++ E  GGD   + +
Sbjct: 591  GVMPQTIEAIKHAKAAEVPIIVAVNKMDKPGSDPTRVVNELLQHEIVVESLGGDTQLIEV 650

Query: 542  SAKQGTNIDGLLEAILLQAEVLELKAVKQGMASGVVIESRLDKGRGPVATVLVQSGTLRK 601
            SAK  T +D LLEAILLQAEVL+LKA     A GVVIE++LDKGRG V+TVLV  GTL++
Sbjct: 651  SAKARTGLDNLLEAILLQAEVLDLKANPDRSADGVVIEAKLDKGRGAVSTVLVNRGTLKR 710

Query: 602  GDIVLCGQEYGRVRAMRDEVGNEVEEAGPSIPVEILGLSGVPAAGDEATVVRDERKAREV 661
            GDIV+ G ++G+VRA+ +E   +++EAGP+ PVEILGL GVP+ GD   VV +E +ARE+
Sbjct: 711  GDIVVAGSQWGKVRALLNERNEQLQEAGPATPVEILGLDGVPSPGDAFAVVENEARAREL 770

Query: 662  ANYRAGKFREVKLAR-QQKSKLENMFSNMTAGDVAELNIVLKADVQGSVEAIADSLTKLS 720
              YR    RE  +A     + + +M + +    + EL +V+KADVQGS EAI  SL K++
Sbjct: 771  TEYRIRLKREKSMAPVGAGASMADMMAKLQDKKLKELPLVIKADVQGSAEAIIGSLDKMA 830

Query: 721  TDEVKVNIVGSGVGGITETDAVLAAASNAIVVGFNVRADASARRMIEAENIDLRYYSIIY 780
            TDEV+  I+ SG G I+E+D +LA  + A V+GFNVRA A AR + E E +++RYY+IIY
Sbjct: 831  TDEVRARIILSGAGAISESDVMLAKGAGAPVIGFNVRASAQARALAEREGVEIRYYAIIY 890

Query: 781  QLIDEVKQAMSGMLSPEFKQEIIGLAEVRDVFKSPKLGAIAGCMVTEGVIKRNAPIRVLR 840
             L+D++K  +SGML+P  ++  +G AEV   F   K+G +AGC VTEGV+++ A +R++R
Sbjct: 891  DLLDDIKGVLSGMLAPIQRETFLGNAEVLQAFDISKIGKVAGCKVTEGVVRKGAKVRIIR 950

Query: 841  DNVVIYE-GELESLRRFKDDVAEVKNGYECGIGVKNYNDVRVGDQIEVFETIEIQRTID 898
             ++V+ E G L++L+RFKD+V EV  G ECG+    + D++VGD IE F   EI+R +D
Sbjct: 951  QDIVVLELGTLQTLKRFKDEVNEVPVGQECGMMFAGFQDIKVGDTIECFTVEEIKRQLD 1009



 Score = 37.0 bits (84), Expect = 6e-06
 Identities = 42/173 (24%), Positives = 69/173 (39%), Gaps = 21/173 (12%)

Query: 51  KEHGDATGSEPTRLTLQRK------TRSTLSVNAGGGKSKNVQVEVRKKRTYVKRSSVED 104
           + H  A+G+     + +R+       R       GGG +  +  E  + R  V  ++ E 
Sbjct: 50  RTHAPASGNLAAPSSAERRHGEAPAPRPAPPQGGGGGSAGGLSQEELRARQRVVDAAREA 109

Query: 105 EATREAEEAAM----RAAEEQAKREAEEAAQRAAEEK--------AKREAEEAAKREAEA 152
           +A + AE+AA     RAA+E A+REA   A +AA E+        A+  A  A       
Sbjct: 110 QARQVAEQAAAEARARAAQEAAQREA---AAKAAAERAAAAPPPVAQAPAAPAPAAPVTP 166

Query: 153 KRMAEEKAKRETQAATQPRSDEEKLKQEAARKEAEALKRRQEEEARRKAEEES 205
              A +  +   QA   P +  +   ++  R  A    R  E    R+ +  S
Sbjct: 167 PPAAPQAPRPVAQAPVAPSAPRQDAPRQDTRAAAPGQTRTYEPSRDRRDDRPS 219