Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 1040 a.a., translation initiation factor IF-2 (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  623 bits (1607), Expect = 0.0
 Identities = 364/849 (42%), Positives = 509/849 (59%), Gaps = 45/849 (5%)

Query: 88   VEVRKKRTYVKRSSVEDEATREAEEAAMRAAEEQAKREAEEAAQ--RAAEEKAKREAEEA 145
            VEV K    V    V+ E  +  E A ++A E + +R AE  A      EE A +E E  
Sbjct: 198  VEVEK----VVVEEVKKEEPKVVETAPVKAEERKVERTAEVTATVTTPTEENASKENEVF 253

Query: 146  AKREAEAKRMAEEKAKRETQAATQPRSDEEKLKQEAARKEAEALKRRQEEEARRKAE--E 203
              R+ E         + +  A  Q    ++K K+E  R+  E  K RQ+++   K    +
Sbjct: 254  KIRQPELGAKINVIGQIDLAALNQSTRPKKKSKEEKRREREEKEKVRQDQKKLMKEAIIK 313

Query: 204  ESRRQLEKVRELAEKNGERWSADKETVGDMQENTDYH-VTTSRYAREAEDE-----ADLH 257
            E R++  K  +   K+    +A K+     +E  D + V TS +A    +         H
Sbjct: 314  EIRKEDSKQAKPGVKDNNADAARKKRNRINKEKVDVNNVATSNFAAPRPNTQTGKGGGNH 373

Query: 258  EEGARRRSTKANKRKMSSRDDNQERDSRP----------------------------RGG 289
                 +   + N    + +++N++R  +P                            +  
Sbjct: 374  PRPQGQGQGQGNNNNNNKKNNNKDRFKKPVIKQEVSEEDVAKQVKETLARLTTKGKNKTS 433

Query: 290  KAGRKGRINKPMSMQHGFDKTAVVAKADVVVGETIVVSELAQKMSVKATEVIKVMMKMGA 349
            K  ++ R      MQ   D+    +K  + + E +  +ELA  M V   +VI   M +G 
Sbjct: 434  KYRKEKREMASNRMQELEDQEMAESKV-LKLTEFVTANELATMMDVSVNQVIATCMSIGM 492

Query: 350  MATINQVIDQETAQLVAEEMGHKVVLRKENELEEAILSDRDDKFEEVSRAPVVTIMGHVD 409
            M +INQ +D ET  LVAEE G K       E+ +AI+ + D   +   RAP+VT+MGHVD
Sbjct: 493  MVSINQRLDAETINLVAEEFGFKTEYVSA-EVAQAIVEEEDAPEDLQPRAPIVTVMGHVD 551

Query: 410  HGKTSTLDYIRRTHVASGEAGGITQHIGAYHVETPNGM-ITFLDTPGHAAFTAMRARGAQ 468
            HGKTS LDYIR+ +V +GEAGGITQHIGAY+V+  +G  ITFLDTPGH AFTAMRARGA+
Sbjct: 552  HGKTSLLDYIRKANVIAGEAGGITQHIGAYNVQLEDGRRITFLDTPGHEAFTAMRARGAK 611

Query: 469  ATDIVVLVVAADDGVMPQTVEAIQHAKAAGVPLIVAVNKIDKDTANPDNVKTELSQYNVM 528
             TDI +++VAADD VMPQT EAI HA AAGVP++ A+NK+DK TANPD +K EL+  N +
Sbjct: 612  VTDIAIIIVAADDNVMPQTKEAINHAMAAGVPIVFAINKVDKPTANPDKIKEELAAMNYL 671

Query: 529  PEEWGGDNMFVHISAKQGTNIDGLLEAILLQAEVLELKAVKQGMASGVVIESRLDKGRGP 588
             EEWGG      ISAK+G  ++ L+E +LL+AE+L+LKA     A+G +IES LDKGRG 
Sbjct: 672  VEEWGGKYQSQDISAKKGMGVEDLMEKVLLEAEMLDLKANPNRNATGSIIESSLDKGRGY 731

Query: 589  VATVLVQSGTLRKGDIVLCGQEYGRVRAMRDEVGNEVEEAGPSIPVEILGLSGVPAAGDE 648
            VATVLV +GTL+ GDIVL G  YGRV+AM +E    V+EAGP+ P  ILGL+G PAAGD 
Sbjct: 732  VATVLVSNGTLKVGDIVLAGTSYGRVKAMFNERNQRVKEAGPAEPALILGLNGAPAAGDT 791

Query: 649  ATVVRDERKAREVANYRAGKFREVKLARQQKSKLENMFSNMTAGDVAELNIVLKADVQGS 708
              VV  +++ARE+ N R    RE  L  Q+   L+ +   +  G+  ELNI++K DV GS
Sbjct: 792  FHVVESDQEAREITNKREQLAREQGLRTQKILTLDELGRRIALGNFQELNIIVKGDVDGS 851

Query: 709  VEAIADSLTKLSTDEVKVNIVGSGVGGITETDAVLAAASNAIVVGFNVRADASARRMIEA 768
            VEA++DSL KLST++++VN++  GVG I+E+D  LAAAS+AI+VGF VR   +A +M E 
Sbjct: 852  VEALSDSLIKLSTEQIQVNVIHKGVGAISESDVSLAAASDAIIVGFQVRPSGAAAKMAEQ 911

Query: 769  ENIDLRYYSIIYQLIDEVKQAMSGMLSPEFKQEIIGLAEVRDVFKSPKLGAIAGCMVTEG 828
            E +D+R YS+IY  I+EVK AM GML+PE K++I    E+R+VF   K+G +AG +V  G
Sbjct: 912  EGVDIRKYSVIYDAIEEVKAAMEGMLAPELKEQITATIEIREVFNITKVGLVAGAVVKTG 971

Query: 829  VIKRNAPIRVLRDNVVIYEGELESLRRFKDDVAEVKNGYECGIGVKNYNDVRVGDQIEVF 888
             +KR+   R++RD +VI+ G + +L+RFKDDV EV   +ECGI + N ND++VGD IE F
Sbjct: 972  KVKRSDKARLIRDGIVIFTGNINALKRFKDDVKEVGTNFECGISLVNCNDMKVGDMIETF 1031

Query: 889  ETIEIQRTI 897
            E IE+++T+
Sbjct: 1032 EEIEVKQTL 1040