Pairwise Alignments

Query, 898 a.a., translation initiation factor IF-2 from Vibrio cholerae E7946 ATCC 55056

Subject, 889 a.a., translation initiation factor IF-2 (RefSeq) from Shewanella sp. ANA-3

 Score = 1147 bits (2967), Expect = 0.0
 Identities = 609/899 (67%), Positives = 710/899 (78%), Gaps = 12/899 (1%)

Query: 1   MTQITVKALSEEIGTPVDRLLEQLADAGMNKAVADHVSEDEKQKLLAHLRKEHGDATGSE 60
           M   TV+ L+ E+G  V+RL+EQ + AG+ K   D+VSE EKQ+LL +L+K+HG    S 
Sbjct: 1   MADTTVEKLATEVGKSVERLIEQFSQAGIKKGQTDNVSEAEKQQLLDYLKKQHGGE--SA 58

Query: 61  PTRLTLQRKTRSTLSVNAGGGKSKNVQVEVRKKRTYVKRSSVEDEATREAEEAAMRAAEE 120
           PT++TLQRKT STLSV   GG+SK+V+VEVRK RT+VKR   E     E E  A   AE 
Sbjct: 59  PTKMTLQRKTVSTLSVAGNGGQSKDVKVEVRKTRTFVKRDVSEAVLKAEEEAKAKAEAEA 118

Query: 121 QAKREAEEAAQRAAEEKAKREAEEAAKREAEAKRMAEEKAKRETQAATQPRSDEEKLKQE 180
           QAK EAE  A+  AE KAK +AE  A+ +A+A   A+ KAK  T A T   +  E    E
Sbjct: 119 QAKAEAEAKARAEAEAKAKADAEAKAEAKAKADAEAKAKAKAATDAKTTKDTSPEA---E 175

Query: 181 AARKEAEALKRRQEEEARRKAEEESRRQLEKVRELAEKNGERWSADKETVGDMQENTDYH 240
           AAR EAE LK  Q E  +RK +EE+ +  EK R LAE+N +RW  ++    + +  +D+H
Sbjct: 176 AARVEAERLKAAQAEATKRKQDEEAAKAAEKARLLAEENSKRWDEEERQRKEAERYSDHH 235

Query: 241 VTTSRYAREAEDEADLHEEGARRRSTKANKRKMSSRDDNQERDSRPRGGKAGRKGRINKP 300
           +TTS+ AR AED +D+ EE   RR+   N  K + R     RD R +      + R   P
Sbjct: 236 ITTSKVARAAEDSSDMDEEKRGRRARNKNTAK-TKRGGKDARDGREKH----MRNRSTAP 290

Query: 301 MSMQHGFDKTAVVAKADVVVGETIVVSELAQKMSVKATEVIKVMMKMGAMATINQVIDQE 360
            SM HGF+K       DV +GET+ V+ELA  M+VKATE+IK MMKMG+M TINQV+DQE
Sbjct: 291 ESMAHGFNKPVAAVTRDVRIGETVTVAELAHLMAVKATEIIKQMMKMGSMVTINQVLDQE 350

Query: 361 TAQLVAEEMGHKVVLRKENELEEAILSDRDDK--FEEVSRAPVVTIMGHVDHGKTSTLDY 418
           TAQLVAEEMGHKVVL +ENELE+ +LS+RD++   +   RAPVVTIMGHVDHGKTS LDY
Sbjct: 351 TAQLVAEEMGHKVVLIRENELEQQVLSERDEEGGVKLEPRAPVVTIMGHVDHGKTSLLDY 410

Query: 419 IRRTHVASGEAGGITQHIGAYHVETPNGMITFLDTPGHAAFTAMRARGAQATDIVVLVVA 478
           IRR  VA+GEAGGITQHIGAYHVET NGMITFLDTPGHAAFTAMRARGA+ATDIVVLVVA
Sbjct: 411 IRRAKVAAGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTAMRARGAKATDIVVLVVA 470

Query: 479 ADDGVMPQTVEAIQHAKAAGVPLIVAVNKIDKDTANPDNVKTELSQYNVMPEEWGGDNMF 538
           ADDGVMPQT+EAIQHAKA  VPLIVAVNK+DK  A+ D VK+EL+Q+ VM E+WGGDNMF
Sbjct: 471 ADDGVMPQTIEAIQHAKAGNVPLIVAVNKMDKPEADIDRVKSELAQHGVMSEDWGGDNMF 530

Query: 539 VHISAKQGTNIDGLLEAILLQAEVLELKAVKQGMASGVVIESRLDKGRGPVATVLVQSGT 598
             +SAK G  +D LLE ILLQAEVLELKAV+ GMA+GVVIES+LDKGRGPVAT+LVQ GT
Sbjct: 531 AFVSAKTGAGVDDLLEGILLQAEVLELKAVRDGMAAGVVIESQLDKGRGPVATILVQEGT 590

Query: 599 LRKGDIVLCGQEYGRVRAMRDEVGNEVEEAGPSIPVEILGLSGVPAAGDEATVVRDERKA 658
           LR+GDIVLCG EYG++RAM+DE G  + EAGPSIPVEILGLSGVP+AGDEATVVRDERKA
Sbjct: 591 LRQGDIVLCGLEYGKIRAMKDENGRSITEAGPSIPVEILGLSGVPSAGDEATVVRDERKA 650

Query: 659 REVANYRAGKFREVKLARQQKSKLENMFSNMTAGDVAELNIVLKADVQGSVEAIADSLTK 718
           REVA YR GKFR+VKLARQQKSKLENMF+NMT G+V ELNIVLKADVQGS+EAI DSL  
Sbjct: 651 REVALYRQGKFRDVKLARQQKSKLENMFANMTEGEVKELNIVLKADVQGSLEAITDSLMG 710

Query: 719 LSTDEVKVNIVGSGVGGITETDAVLAAASNAIVVGFNVRADASARRMIEAENIDLRYYSI 778
           LSTDEVKVNI+  GVG +TETDA LAAASNAI+VGFNVRADA AR+ IE+E++DLRYYS+
Sbjct: 711 LSTDEVKVNIIARGVGALTETDATLAAASNAIMVGFNVRADAQARKTIESESVDLRYYSV 770

Query: 779 IYQLIDEVKQAMSGMLSPEFKQEIIGLAEVRDVFKSPKLGAIAGCMVTEGVIKRNAPIRV 838
           IY LIDEVK AM+GMLSPEFKQ+IIGLAEVRDVFKSPKLGAIAGCMVTEG IKR+APIRV
Sbjct: 771 IYNLIDEVKAAMTGMLSPEFKQQIIGLAEVRDVFKSPKLGAIAGCMVTEGTIKRSAPIRV 830

Query: 839 LRDNVVIYEGELESLRRFKDDVAEVKNGYECGIGVKNYNDVRVGDQIEVFETIEIQRTI 897
           LRDNVVI+EGELESLRRFKDDV EV+NG ECGIGVKNYNDVRVGDQIEVFET+E+ RT+
Sbjct: 831 LRDNVVIFEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRVGDQIEVFETVEVARTL 889