Pairwise Alignments

Query, 495 a.a., transcription termination/antitermination protein NusA from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., Probable N utilization substance protein A NusA from Mycobacterium tuberculosis H37Rv

 Score =  199 bits (507), Expect = 1e-55
 Identities = 117/341 (34%), Positives = 196/341 (57%), Gaps = 30/341 (8%)

Query: 6   LAVVEAVSNEKAVPRERIFEALETALATSTKKKYEIEIDVRVAIDRKTGAFETFRRWLVV 65
           +A + A+  ++ +    + E +++AL T+ +     + D R+ IDRKTG         VV
Sbjct: 5   MAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTG---------VV 55

Query: 66  ENVEHPTKEISFEAASFDDDSVQLGDYIEDQIESVTFDRITTQTAKQVIVQKVREAERAQ 125
             +   T E     + +DD     G             RI   TA+QV++Q+ R+AE  +
Sbjct: 56  RVIARETDEAGNLISEWDDTPEGFG-------------RIAATTARQVMLQRFRDAENER 102

Query: 126 IVEQFIDNEGELVTGVVKKVNRET----VILDLGNN---AEAVILREDQLPRENFRPGDR 178
              +F   EGE+V GV+++ +R      V++ +G     +E VI   +Q+P E++  G+R
Sbjct: 103 TYGEFSTREGEIVAGVIQRDSRANARGLVVVRIGTETKASEGVIPAAEQVPGESYEHGNR 162

Query: 179 VRGLLYKVAPEARGFQLFITRSKPEMLAELFRVEVPEIGEELIELKAAARDPGSRAKIAV 238
           +R  +  V   AR   + ++R+ P ++ +LF +EVPEI +  +E+ A AR+ G R+KIAV
Sbjct: 163 LRCYVVGVTRGAREPLITLSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAGHRSKIAV 222

Query: 239 KTNDKRIDPVGACVGMRGARVQAVSGELGGERIDIVLWDDNPAQFVINAMAPADVASI-I 297
           ++N   ++  GAC+G  G RV+ V  EL GE+IDI+ +DD+PA+FV NA++PA V S+ +
Sbjct: 223 RSNVAGLNAKGACIGPMGQRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSV 282

Query: 298 MDEDAHSMDIAVEADNLAQAIGRNGQNVRLASQLTGWELNV 338
           +D+ A +  + V    L+ AIG+ GQN RLA++LTGW +++
Sbjct: 283 IDQTARAARVVVPDFQLSLAIGKEGQNARLAARLTGWRIDI 323