Pairwise Alignments

Query, 151 a.a., ribosome maturation factor RimP from Vibrio cholerae E7946 ATCC 55056

Subject, 196 a.a., FIG000325: clustered with transcription termination protein NusA from Xanthomonas campestris pv. campestris strain 8004

 Score =  118 bits (295), Expect = 6e-32
 Identities = 66/151 (43%), Positives = 94/151 (62%), Gaps = 8/151 (5%)

Query: 7   QLTEMLEAPVVAAGYELVGLEFVRAGQHSTLRIFID------HENGITVEDCAEVSRQVS 60
           ++  +L   V + G EL+G+E++ A   +TLR++ID       +  I V+DC  VSR+VS
Sbjct: 7   EIANLLGPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPDRIINVDDCERVSREVS 66

Query: 61  AVLDVEDPISVVYNLEVSSPGLERPLFKAAHYEQFIGHEVSIVLKMAVGNRRKWKGVIQS 120
           A LDVEDPIS  Y LEVSSPG++RPLF    + + +G    IVLK+A   RR+++G I  
Sbjct: 67  AQLDVEDPISGNYTLEVSSPGVDRPLFTLDQFARHVGESAKIVLKLAQDGRRRFQGQIVR 126

Query: 121 IDGETVAVM--VDGQEEHFALSNISKANLIP 149
           ID E  AV+  VDG++      NI KA ++P
Sbjct: 127 IDTEAAAVVFSVDGKDVQIGFGNIDKARILP 157