Pairwise Alignments

Query, 651 a.a., ATP-dependent zinc metalloprotease FtsH from Vibrio cholerae E7946 ATCC 55056

Subject, 632 a.a., FtsH peptidase homologue, chloroplast. Metallo peptidase. MEROPS family M41 from Synechococcus elongatus PCC 7942

 Score =  489 bits (1258), Expect = e-142
 Identities = 267/584 (45%), Positives = 386/584 (66%), Gaps = 14/584 (2%)

Query: 34  AVDYTTFVKEVGQGQIQEAQFNNGEITFMRRGGGSRYVTYMPVYDQ--KLLDDLINQDVK 91
           ++DY+  +K++  GQ+Q   ++  +     +  G R    +P+++Q  +L++     +V 
Sbjct: 46  SLDYSGLLKDIADGQVQSIDYDPVQRVARVQLQGRRSAE-VPLFNQNPELIETARRYNVP 104

Query: 92  VQGTPPEEQSLLGTIFISWFPMILLIGVWIFFMRQMQGGGGKGAMSFGKSKARMMSEDQI 151
            + TP ++ S L    ++   +IL++ V + F+ +   G    A++FGKS+AR   E + 
Sbjct: 105 FEVTPTQDNSALAGTLVN-LGLILILIVGLVFLLRRSAGAANQALNFGKSRARFQMEAKT 163

Query: 152 KTTFSDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAG 211
              F DVAG +EAKE+++E+V +LR   RF  +G +IP GVL+VGPPGTGKTLLAKAIAG
Sbjct: 164 GVMFEDVAGIEEAKEELQEVVSFLRSSDRFTAVGARIPRGVLLVGPPGTGKTLLAKAIAG 223

Query: 212 EAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGG 271
           EA VPFF++SGS+FVEMFVGVGASRVRD+F +AK+ SPCI+FIDEIDAVGRQRGAG+GGG
Sbjct: 224 EAGVPFFSMSGSEFVEMFVGVGASRVRDLFRKAKENSPCIVFIDEIDAVGRQRGAGIGGG 283

Query: 272 HDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGR 331
           +DEREQTLNQ+L EMDGFE N G+I+IAATNRPDVLD ALLRPGRFDRQ+ V LP   GR
Sbjct: 284 NDEREQTLNQLLTEMDGFEENSGVIIIAATNRPDVLDSALLRPGRFDRQITVDLPSYNGR 343

Query: 332 EQILKVHMRKVPLANDVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRNVSMVEFEL 391
             IL+VH R   LA +V    IAR TPGFSGA+LANL+NEAA+  AR NK  V   + + 
Sbjct: 344 LGILQVHARNKKLAEEVSLEAIARRTPGFSGAELANLLNEAAILTARRNKTAVDETDIDD 403

Query: 392 AKDKIMMGAERRSMVMSEEIKESTAYHEAGHAVVGRLVPEHDPVYKVSIIPRGRAL-GVT 450
           A D++ +G     ++ S++ K   AYHE GHA++  L+   D + KV+IIPR   + G  
Sbjct: 404 AIDRVTIGMTLSPLLDSQK-KRLIAYHEIGHALLMTLLKHSDRLDKVTIIPRSGGIGGFA 462

Query: 451 MYLPEQDRVS---MSKQHLESMISSLYGGRLAEELIYGKEKVSTGASNDIERATEIARKM 507
             +P ++ +     S+  L   I    GGR AEE+++G  +V+ GA++DIE  T +AR+M
Sbjct: 463 KPIPNEELIDSGLYSRAWLRDRIVVALGGRAAEEVVFGDAEVTQGAASDIEMITNLAREM 522

Query: 508 VTQWGFSEKLGPMLYAEDEGEVFLGRS-VTQTKHMSDDTAKLIDDEVRQIIDRNYERARQ 566
           +T++G S+ LGP+    D+GEVFLGR  +++    S+  A  ID ++R +I   +  ARQ
Sbjct: 523 ITRYGMSD-LGPLALESDQGEVFLGRDWMSRRADYSESVAAQIDRKIRALIQTCHAEARQ 581

Query: 567 IIMDNMDIMHAMKDALMKYETIDAGQIDDLMARKP---VIREPA 607
           ++++N ++M  + D L+  E I+  +   ++ + P    + +PA
Sbjct: 582 LLLENRELMDRLVDRLIDQELIEGDEFRKIVEQFPKSSAVTQPA 625