Pairwise Alignments

Query, 651 a.a., ATP-dependent zinc metalloprotease FtsH from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., FtsH peptidase homologue, chloroplast. Metallo peptidase. MEROPS family M41 from Synechococcus elongatus PCC 7942

 Score =  528 bits (1360), Expect = e-154
 Identities = 290/612 (47%), Positives = 398/612 (65%), Gaps = 22/612 (3%)

Query: 6   KNLILW-LVIAVVLMSVFQSFGPGEN---------NGRAVDYTTFVKEVGQGQIQEAQFN 55
           + L LW L I V+   V+Q  G G N             + Y  F++ +  G++    F 
Sbjct: 6   RTLALWTLPILVIGFFVWQG-GIGANLQTNSTINAASTRMTYGRFLEYLDAGRVTAVDFY 64

Query: 56  NGEITFMRRGGG-------SRYVTYMPVYDQKLLDDLINQDVKVQGTPPEEQSLL-GTIF 107
            G  T +             R    +P     L+  L + D+     PP     + G + 
Sbjct: 65  EGGRTAIVEAVDPDLDNRLQRLRVDLPGTSPDLITRLRDSDINFDVHPPRNDGAIWGLLS 124

Query: 108 ISWFPMILLIGVWIFFMRQMQGGGGKG-AMSFGKSKARMMSEDQIKTTFSDVAGCDEAKE 166
              FP++L++G++  F R     GG G AM FGKSKAR   + +    F DVAG +EAKE
Sbjct: 125 NLIFPILLIVGLFFLFRRSGNVPGGPGQAMQFGKSKARFQMDAKTGVLFDDVAGIEEAKE 184

Query: 167 DVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFV 226
           +++E+V +L++  RF  +G +IP GVL+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FV
Sbjct: 185 ELQEVVTFLKNSERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFV 244

Query: 227 EMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQMLVEM 286
           EMFVGVGASRVRD+F++AK+ +PCI+FIDEIDAVGRQRGAG+GGG+DEREQTLNQ+L EM
Sbjct: 245 EMFVGVGASRVRDLFKKAKENAPCIVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEM 304

Query: 287 DGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPLAN 346
           DGFEGN GII+IAATNRPDVLD AL RPGRFDRQ++V  PD++GR +ILKVH R   LA 
Sbjct: 305 DGFEGNTGIIIIAATNRPDVLDAALTRPGRFDRQIIVDAPDIKGRLEILKVHARNKKLAE 364

Query: 347 DVEPSLIARGTPGFSGADLANLVNEAALFAARGNKRNVSMVEFELAKDKIMMGAERRSMV 406
           DV   +IAR TPGF+GADLANL+NEAA+  AR  K  +++ E + A D+++ G E   +V
Sbjct: 365 DVSLDVIARRTPGFAGADLANLLNEAAILTARRRKDAITLTEIDDAVDRVVAGMEGTPLV 424

Query: 407 MSEEIKESTAYHEAGHAVVGRLVPEHDPVYKVSIIPRGRALGVTMYLPEQDRVSMSKQHL 466
             +  K   AYHE GHA+VG LV +HDPV KV++IPRG+A G+T + P++++   S+  +
Sbjct: 425 DGKS-KRLIAYHEVGHAIVGTLVKDHDPVQKVTLIPRGQAQGLTWFAPDEEQGLTSRAQI 483

Query: 467 ESMISSLYGGRLAEELIYGKEKVSTGASNDIERATEIARKMVTQWGFSEKLGPMLYAEDE 526
            + I    GGR AE++I+G ++V+TGA ND+++ T +AR+MVT++G S+ LGP+      
Sbjct: 484 LARIKGALGGRAAEDVIFGHDEVTTGAGNDLQQVTGMARQMVTRFGMSD-LGPLSLEGQS 542

Query: 527 GEVFLGRSVTQTKHMSDDTAKLIDDEVRQIIDRNYERARQIIMDNMDIMHAMKDALMKYE 586
            EVFLGR +      S+  A  ID +V  I+D  Y+   Q+I DN  ++  + D L++ E
Sbjct: 543 QEVFLGRDLMTRSEYSERIAIRIDAQVHDIVDHCYQETLQLIRDNRIVIDRLVDLLIEKE 602

Query: 587 TIDAGQIDDLMA 598
           TID  +   ++A
Sbjct: 603 TIDGDEFRQIVA 614